Cpa|evm.model.tig00021222.7

Description : RNA processing.RNA quality control Exon Junction complex (EJC).peripheral components.RNPS1 component

Gene families : OG0003818 (Archaeplastida) Phylogenetic Tree(s): OG0003818_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00021222.7
Cluster	HCCA: Cluster_91

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00071p00150630	evm_27.TU.AmTr_v1...	RNA processing.RNA quality control Exon Junction complex...	0.03	Archaeplastida
Cre03.g164950	No alias	RNA processing.RNA quality control Exon Junction complex...	0.04	Archaeplastida
MA_10428760g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_3280g0020	No alias	component RNPS1 of RNA quality control Exon Junction complex	0.02	Archaeplastida
Mp4g11580.1	No alias	component RNPS1 of RNA quality control Exon Junction complex	0.03	Archaeplastida
Solyc10g005590.4.1	No alias	component RNPS1 of RNA quality control Exon Junction complex	0.03	Archaeplastida
Zm00001e028289_P001	No alias	component RNPS1 of RNA quality control Exon Junction complex	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	71	138

External Links

No external refs found!