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Description : CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, cysteine-containing subtype (InterPro:IPR006553); BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT5G21900.1); Has 5028 Blast hits to 2547 proteins in 240 species: Archae - 0; Bacteria - 125; Metazoa - 2326; Fungi - 765; Plants - 1373; Viruses - 0; Other Eukaryotes - 439 (source: NCBI BLink).
Gene families : OG0004970 (Archaeplastida) Phylogenetic Tree(s): OG0004970_tree ,
OG_05_0004976 (LandPlants) Phylogenetic Tree(s): OG_05_0004976_tree ,
OG_06_0004012 (SeedPlants) Phylogenetic Tree(s): OG_06_0004012_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT2G06040 | |
| Cluster | HCCA: Cluster_57 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | ND | Interproscan |
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000018 | regulation of DNA recombination | IEP | Neighborhood |
| MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
| BP | GO:0000289 | nuclear-transcribed mRNA poly(A) tail shortening | IEP | Neighborhood |
| BP | GO:0000724 | double-strand break repair via homologous recombination | IEP | Neighborhood |
| BP | GO:0000725 | recombinational repair | IEP | Neighborhood |
| BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | Neighborhood |
| BP | GO:0002831 | regulation of response to biotic stimulus | IEP | Neighborhood |
| BP | GO:0002833 | positive regulation of response to biotic stimulus | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003677 | DNA binding | IEP | Neighborhood |
| MF | GO:0003727 | single-stranded RNA binding | IEP | Neighborhood |
| MF | GO:0003743 | translation initiation factor activity | IEP | Neighborhood |
| MF | GO:0004386 | helicase activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005524 | ATP binding | IEP | Neighborhood |
| BP | GO:0006259 | DNA metabolic process | IEP | Neighborhood |
| BP | GO:0006281 | DNA repair | IEP | Neighborhood |
| BP | GO:0006302 | double-strand break repair | IEP | Neighborhood |
| BP | GO:0006310 | DNA recombination | IEP | Neighborhood |
| BP | GO:0006401 | RNA catabolic process | IEP | Neighborhood |
| BP | GO:0006402 | mRNA catabolic process | IEP | Neighborhood |
| BP | GO:0006413 | translational initiation | IEP | Neighborhood |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Neighborhood |
| BP | GO:0007031 | peroxisome organization | IEP | Neighborhood |
| MF | GO:0008026 | ATP-dependent helicase activity | IEP | Neighborhood |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | Neighborhood |
| MF | GO:0008143 | poly(A) binding | IEP | Neighborhood |
| MF | GO:0008144 | drug binding | IEP | Neighborhood |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | Neighborhood |
| BP | GO:0010048 | vernalization response | IEP | Neighborhood |
| BP | GO:0010520 | regulation of reciprocal meiotic recombination | IEP | Neighborhood |
| BP | GO:0010564 | regulation of cell cycle process | IEP | Neighborhood |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0010639 | negative regulation of organelle organization | IEP | Neighborhood |
| BP | GO:0010948 | negative regulation of cell cycle process | IEP | Neighborhood |
| BP | GO:0016444 | somatic cell DNA recombination | IEP | Neighborhood |
| MF | GO:0016462 | pyrophosphatase activity | IEP | Neighborhood |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Neighborhood |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Neighborhood |
| MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
| MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Neighborhood |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
| BP | GO:0031349 | positive regulation of defense response | IEP | Neighborhood |
| BP | GO:0032101 | regulation of response to external stimulus | IEP | Neighborhood |
| BP | GO:0032103 | positive regulation of response to external stimulus | IEP | Neighborhood |
| MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
| BP | GO:0040020 | regulation of meiotic nuclear division | IEP | Neighborhood |
| MF | GO:0043168 | anion binding | IEP | Neighborhood |
| BP | GO:0043902 | positive regulation of multi-organism process | IEP | Neighborhood |
| BP | GO:0045128 | negative regulation of reciprocal meiotic recombination | IEP | Neighborhood |
| BP | GO:0045786 | negative regulation of cell cycle | IEP | Neighborhood |
| BP | GO:0045835 | negative regulation of meiotic nuclear division | IEP | Neighborhood |
| BP | GO:0045910 | negative regulation of DNA recombination | IEP | Neighborhood |
| BP | GO:0048584 | positive regulation of response to stimulus | IEP | Neighborhood |
| BP | GO:0051053 | negative regulation of DNA metabolic process | IEP | Neighborhood |
| BP | GO:0051129 | negative regulation of cellular component organization | IEP | Neighborhood |
| BP | GO:0051445 | regulation of meiotic cell cycle | IEP | Neighborhood |
| BP | GO:0051447 | negative regulation of meiotic cell cycle | IEP | Neighborhood |
| BP | GO:0051783 | regulation of nuclear division | IEP | Neighborhood |
| BP | GO:0051784 | negative regulation of nuclear division | IEP | Neighborhood |
| BP | GO:0060631 | regulation of meiosis I | IEP | Neighborhood |
| MF | GO:0070035 | purine NTP-dependent helicase activity | IEP | Neighborhood |
| MF | GO:0070717 | poly-purine tract binding | IEP | Neighborhood |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
| BP | GO:0110029 | negative regulation of meiosis I | IEP | Neighborhood |
| BP | GO:1900424 | regulation of defense response to bacterium | IEP | Neighborhood |
| BP | GO:1900426 | positive regulation of defense response to bacterium | IEP | Neighborhood |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| BP | GO:2000242 | negative regulation of reproductive process | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |