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  5. Cpa|evm.model.tig00021275.23

Cpa|evm.model.tig00021275.23


Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL27 component


Gene families : OG0002403 (Archaeplastida) Phylogenetic Tree(s): OG0002403_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021275.23
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00176990 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.21 Archaeplastida
AMTR_s00045p00086530 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.11 Archaeplastida
AT2G32220 No alias Ribosomal L27e protein family 0.03 Archaeplastida
AT3G22230 No alias Ribosomal L27e protein family 0.31 Archaeplastida
AT4G15000 No alias Ribosomal L27e protein family 0.37 Archaeplastida
Cre17.g701650 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.34 Archaeplastida
GSVIVT01012080001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.07 Archaeplastida
GSVIVT01020410001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 Archaeplastida
Gb_34700 No alias component RPL27 of LSU proteome component 0.03 Archaeplastida
Gb_36674 No alias component RPL27 of LSU proteome component 0.15 Archaeplastida
LOC_Os02g18380.1 No alias component RPL27 of LSU proteome component 0.03 Archaeplastida
LOC_Os10g41470.1 No alias component RPL27 of LSU proteome component 0.06 Archaeplastida
MA_10034g0010 No alias component RPL27 of LSU proteome component 0.03 Archaeplastida
MA_3390g0010 No alias component RPL27 of LSU proteome component 0.23 Archaeplastida
Mp4g23910.1 No alias component RPL27 of LSU proteome component 0.42 Archaeplastida
Pp3c15_4610V3.1 No alias Ribosomal L27e protein family 0.34 Archaeplastida
Pp3c24_20290V3.1 No alias Ribosomal L27e protein family 0.2 Archaeplastida
Pp3c8_24410V3.1 No alias Ribosomal L27e protein family 0.23 Archaeplastida
Smo166700 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.15 Archaeplastida
Solyc06g073300.1.1 No alias component RPL27 of LSU proteome component 0.23 Archaeplastida
Solyc07g043360.1.1 No alias component RPL27 of LSU proteome component 0.1 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005622 intracellular IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001141 Ribosomal_L27e 67 150
No external refs found!