Cpa|evm.model.tig00021318.52

Description : RNA pseudouridine synthase 2, chloroplastic OS=Arabidopsis thaliana

Gene families : OG0004055 (Archaeplastida) Phylogenetic Tree(s): OG0004055_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00021318.52
Cluster	HCCA: Cluster_177

Target	Alias	Description	ECC score	Gene Family Method	Actions
LOC_Os06g50360.1	No alias	dual-specificity tRNA/rRNA pseudouridine synthase (RluA)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR006145	PsdUridine_synth_RsuA/RluD	163	340
IPR002942	S4_RNA-bd	89	134

External Links

No external refs found!