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  5. Cpa|evm.model.tig00021318.73

Cpa|evm.model.tig00021318.73


Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ ubiquitin-fold protein


Gene families : OG0000077 (Archaeplastida) Phylogenetic Tree(s): OG0000077_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021318.73
Cluster HCCA: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
AT2G35635 UBQ7, RUB2 ubiquitin 7 0.01 Archaeplastida
Gb_02030 No alias ubiquitin-fold protein (UBQ) 0.01 Archaeplastida
Gb_35273 No alias ubiquitin-fold protein (UBQ) 0.01 Archaeplastida
LOC_Os02g06640.1 No alias ubiquitin-fold protein (UBQ) 0.01 Archaeplastida
LOC_Os06g46770.2 No alias ubiquitin-fold protein (UBQ) 0.01 Archaeplastida
MA_17567g0010 No alias ubiquitin-fold protein (UBQ) 0.01 Archaeplastida
MA_455989g0010 No alias ubiquitin-fold protein (RUB) 0.02 Archaeplastida
MA_89348g0010 No alias ubiquitin-fold protein (UBQ) 0.01 Archaeplastida
Mp4g02760.1 No alias Ubiquitin-40S ribosomal protein S27a OS=Hordeum vulgare... 0.01 Archaeplastida
Mp8g11720.1 No alias Ubiquitin-NEDD8-like protein RUB1 OS=Arabidopsis... 0.01 Archaeplastida
Pp3c25_6580V3.1 No alias polyubiquitin 10 0.01 Archaeplastida
Zm00001e010317_P001 No alias component RPL40 of LSU proteome component 0.01 Archaeplastida
Zm00001e034164_P001 No alias ubiquitin-fold protein (RUB) 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 243 310
IPR000626 Ubiquitin_dom 531 602
IPR000626 Ubiquitin_dom 459 526
IPR000626 Ubiquitin_dom 3 85
IPR000626 Ubiquitin_dom 387 454
IPR000626 Ubiquitin_dom 90 162
IPR000626 Ubiquitin_dom 167 238
IPR000626 Ubiquitin_dom 315 382
No external refs found!