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  5. Cpa|evm.model.tig00021319.66

Cpa|evm.model.tig00021319.66


Description : RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.THO subcomplex.THOC3/Tex1 component


Gene families : OG0006032 (Archaeplastida) Phylogenetic Tree(s): OG0006032_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021319.66
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
Cre12.g559850 No alias RNA processing.messenger ribonucleoprotein particle... 0.01 Archaeplastida
LOC_Os09g12710.1 No alias component THOC3/Tex1 of mRNP trafficking THO subcomplex 0.02 Archaeplastida
MA_10429878g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_17033g0010 No alias THO complex subunit 3 OS=Arabidopsis thaliana... 0.01 Archaeplastida
Mp3g19760.1 No alias component THOC3/Tex1 of mRNP trafficking THO subcomplex 0.01 Archaeplastida
Pp3c15_8550V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Archaeplastida
Zm00001e033751_P001 No alias component THOC3/Tex1 of mRNP trafficking THO subcomplex 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 170 207
IPR001680 WD40_repeat 10 39
IPR024977 Apc4_WD40_dom 218 265
IPR024977 Apc4_WD40_dom 101 147
No external refs found!