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  5. Cpa|evm.model.tig00021348.58

Cpa|evm.model.tig00021348.58


Description : Putative cyclic nucleotide-gated ion channel 8 OS=Arabidopsis thaliana


Gene families : OG0000137 (Archaeplastida) Phylogenetic Tree(s): OG0000137_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021348.58
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00177p00064020 evm_27.TU.AmTr_v1... Cyclic nucleotide-gated ion channel 2 OS=Arabidopsis thaliana 0.01 Archaeplastida
AMTR_s00210p00019190 evm_27.TU.AmTr_v1... Solute transport.channels.VIC superfamily.cyclic... 0.01 Archaeplastida
Cpa|evm.model.tig00021319.15 No alias No description available 0.03 Archaeplastida
Mp4g11640.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 147 379
IPR000595 cNMP-bd_dom 475 556
No external refs found!