1. Home
  2. Species
  3. Cyanophora paradoxa
  4. Sequence
  5. Cpa|evm.model.tig00021350.31

Cpa|evm.model.tig00021350.31


Description : RNA processing.RNA modification.rRNA/tRNA methylation.C/D small nucleolar ribonucleoprotein (snoRNP) rRNA methylation complex.Nop58 snoRNP scaffold component


Gene families : OG0003184 (Archaeplastida) Phylogenetic Tree(s): OG0003184_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021350.31
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00260990 evm_27.TU.AmTr_v1... RNA processing.RNA modification.rRNA/tRNA... 0.03 Archaeplastida
AT3G05060 No alias NOP56-like pre RNA processing ribonucleoprotein 0.07 Archaeplastida
AT5G27120 No alias NOP56-like pre RNA processing ribonucleoprotein 0.1 Archaeplastida
Cre10.g441400 No alias RNA processing.RNA modification.rRNA/tRNA... 0.16 Archaeplastida
GSVIVT01021905001 No alias RNA processing.RNA modification.rRNA/tRNA... 0.08 Archaeplastida
Gb_26926 No alias snoRNP scaffold component Nop58 of snoRNP rRNA... 0.04 Archaeplastida
LOC_Os03g22740.1 No alias snoRNP scaffold component Nop58 of snoRNP rRNA... 0.03 Archaeplastida
MA_10431466g0010 No alias No annotation 0.04 Archaeplastida
MA_513089g0010 No alias snoRNP scaffold component Nop58 of snoRNP rRNA... 0.04 Archaeplastida
Mp2g00370.1 No alias snoRNP scaffold component Nop58 of snoRNP rRNA... 0.14 Archaeplastida
Pp3c11_14260V3.1 No alias NOP56-like pre RNA processing ribonucleoprotein 0.02 Archaeplastida
Pp3c2_28380V3.1 No alias NOP56-like pre RNA processing ribonucleoprotein 0.04 Archaeplastida
Smo146841 No alias RNA processing.RNA modification.rRNA/tRNA... 0.04 Archaeplastida
Solyc05g055880.4.1 No alias snoRNP scaffold component Nop58 of snoRNP rRNA... 0.02 Archaeplastida
Solyc09g083080.4.1 No alias snoRNP scaffold component Nop58 of snoRNP rRNA... 0.1 Archaeplastida
Zm00001e001659_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e038207_P001 No alias snoRNP scaffold component Nop58 of snoRNP rRNA... 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR012974 NOP5_N 2 65
IPR002687 Nop_dom 166 394
No external refs found!