Cpa|evm.model.tig00021357.16


No description available


Gene families : OG0004183 (Archaeplastida) Phylogenetic Tree(s): OG0004183_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021357.16
Cluster HCCA: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00192420 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
GSVIVT01019063001 No alias No description available 0.03 Archaeplastida
Gb_35816 No alias pre-mRNA-processing protein (LUC7) 0.03 Archaeplastida
LOC_Os02g39300.1 No alias pre-mRNA-processing protein (LUC7) 0.02 Archaeplastida
LOC_Os03g62640.2 No alias pre-mRNA-processing protein (LUC7) 0.02 Archaeplastida
Mp7g03530.1 No alias pre-mRNA-processing protein (LUC7) 0.02 Archaeplastida
Pp3c16_8650V3.1 No alias LUC7 related protein 0.02 Archaeplastida
Pp3c25_5550V3.1 No alias LUC7 related protein 0.04 Archaeplastida
Smo151152 No alias No description available 0.01 Archaeplastida
Solyc05g056280.2.1 No alias pre-mRNA-processing protein (LUC7) 0.02 Archaeplastida
Zm00001e006322_P004 No alias pre-mRNA-processing protein (LUC7) 0.01 Archaeplastida
Zm00001e011667_P003 No alias pre-mRNA-processing protein (LUC7) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEA Interproscan
CC GO:0005685 U1 snRNP IEA Interproscan
BP GO:0006376 mRNA splice site selection IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004882 Luc7-rel 2 260
No external refs found!