1. Home
  2. Species
  3. Cyanophora paradoxa
  4. Sequence
  5. Cpa|evm.model.tig00021462.41

Cpa|evm.model.tig00021462.41


Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS3 component


Gene families : OG0002305 (Archaeplastida) Phylogenetic Tree(s): OG0002305_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021462.41
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00219330 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.25 Archaeplastida
AMTR_s00030p00157370 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.1 Archaeplastida
AT2G31610 No alias Ribosomal protein S3 family protein 0.07 Archaeplastida
AT3G53870 No alias Ribosomal protein S3 family protein 0.16 Archaeplastida
AT5G35530 No alias Ribosomal protein S3 family protein 0.31 Archaeplastida
Cre02.g102250 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.34 Archaeplastida
GSVIVT01015110001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.27 Archaeplastida
GSVIVT01016775001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.21 Archaeplastida
GSVIVT01035451001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.1 Archaeplastida
Gb_26536 No alias component RPS3 of SSU proteome 0.19 Archaeplastida
Gb_26539 No alias component RPS3 of SSU proteome 0.05 Archaeplastida
LOC_Os03g38000.1 No alias component RPS3 of SSU proteome 0.3 Archaeplastida
LOC_Os07g41750.1 No alias component RPS3 of SSU proteome 0.13 Archaeplastida
MA_10436283g0010 No alias component RPS3 of SSU proteome 0.17 Archaeplastida
MA_120861g0010 No alias component RPS3 of SSU proteome 0.17 Archaeplastida
Mp1g16730.1 No alias component RPS3 of SSU proteome 0.42 Archaeplastida
Pp3c11_22640V3.1 No alias Ribosomal protein S3 family protein 0.33 Archaeplastida
Pp3c15_21360V3.1 No alias Ribosomal protein S3 family protein 0.23 Archaeplastida
Pp3c16_3760V3.1 No alias Ribosomal protein S3 family protein 0.17 Archaeplastida
Pp3c5_5330V3.1 No alias Ribosomal protein S3 family protein 0.2 Archaeplastida
Pp3c7_2620V3.1 No alias Ribosomal protein S3 family protein 0.29 Archaeplastida
Pp3c9_12170V3.1 No alias Ribosomal protein S3 family protein 0.31 Archaeplastida
Smo270414 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.14 Archaeplastida
Smo270666 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.1 Archaeplastida
Smo438700 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 Archaeplastida
Solyc07g041310.3.1 No alias component RPS3 of SSU proteome 0.24 Archaeplastida
Solyc08g061843.1.1 No alias component RPS3 of SSU proteome 0.3 Archaeplastida
Zm00001e021687_P001 No alias component RPS3 of SSU proteome 0.37 Archaeplastida
Zm00001e035528_P001 No alias component RPS3 of SSU proteome 0.03 Archaeplastida
Zm00001e040177_P002 No alias component RPS3 of SSU proteome 0.37 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001351 Ribosomal_S3_C 150 232
IPR004044 KH_dom_type_2 64 137
No external refs found!