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  5. Cpa|evm.model.tig00021720.14

Cpa|evm.model.tig00021720.14


Description : RNA processing.organelle machineries.ribonuclease activities.CSP41 endoribonuclease


Gene families : OG0006344 (Archaeplastida) Phylogenetic Tree(s): OG0006344_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021720.14
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00246210 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.ribonuclease... 0.02 Archaeplastida
AT3G63140 CSP41A chloroplast stem-loop binding protein of 41 kDa 0.07 Archaeplastida
Cre10.g440050 No alias RNA processing.organelle machineries.ribonuclease... 0.04 Archaeplastida
GSVIVT01011082001 No alias RNA processing.organelle machineries.ribonuclease... 0.06 Archaeplastida
Gb_01706 No alias endoribonuclease (CSP41) 0.03 Archaeplastida
LOC_Os07g11110.1 No alias endoribonuclease (CSP41) 0.04 Archaeplastida
MA_307070g0010 No alias endoribonuclease (CSP41) 0.04 Archaeplastida
Mp6g11330.1 No alias endoribonuclease (CSP41) 0.04 Archaeplastida
Pp3c3_30330V3.1 No alias chloroplast stem-loop binding protein of 41 kDa 0.06 Archaeplastida
Smo133157 No alias RNA processing.organelle machineries.ribonuclease... 0.01 Archaeplastida
Smo185868 No alias RNA processing.organelle machineries.ribonuclease... 0.04 Archaeplastida
Solyc09g065180.3.1 No alias endoribonuclease (CSP41) 0.06 Archaeplastida
Zm00001e033112_P001 No alias endoribonuclease (CSP41) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0050662 coenzyme binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001509 Epimerase_deHydtase 43 257
No external refs found!