Cpa|evm.model.tig00022075.32

Description : Putative DEAD-box ATP-dependent RNA helicase 29 OS=Arabidopsis thaliana

Gene families : OG0005027 (Archaeplastida) Phylogenetic Tree(s): OG0005027_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00022075.32
Cluster	HCCA: Cluster_85

Target	Alias	Description	ECC score	Gene Family Method
AT1G77030	No alias	hydrolases, acting on acid anhydrides, in...	0.05	Archaeplastida
Cre12.g513701	No alias	DEAD-box ATP-dependent RNA helicase 29 OS=Oryza sativa...	0.03	Archaeplastida
GSVIVT01009983001	No alias	Putative DEAD-box ATP-dependent RNA helicase 29...	0.03	Archaeplastida
Gb_13284	No alias	Putative DEAD-box ATP-dependent RNA helicase 29...	0.01	Archaeplastida
Mp7g18590.1	No alias	Putative DEAD-box ATP-dependent RNA helicase 29...	0.03	Archaeplastida
Smo165331	No alias	Putative DEAD-box ATP-dependent RNA helicase 29...	0.03	Archaeplastida
Smo438217	No alias	Putative DEAD-box ATP-dependent RNA helicase 29...	0.01	Archaeplastida
Zm00001e022381_P001	No alias	DEAD-box ATP-dependent RNA helicase 29 OS=Oryza sativa...	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR012541	DBP10_C	619	686
IPR001650	Helicase_C	303	414
IPR011545	DEAD/DEAH_box_helicase_dom	108	267

External Links

No external refs found!