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  5. Gb_00059

Gb_00059


Description : component RPP0 of LSU proteome component


Gene families : OG0002275 (Archaeplastida) Phylogenetic Tree(s): OG0002275_tree ,
OG_05_0001766 (LandPlants) Phylogenetic Tree(s): OG_05_0001766_tree ,
OG_06_0002404 (SeedPlants) Phylogenetic Tree(s): OG_06_0002404_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_00059
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
AT3G09200 No alias Ribosomal protein L10 family protein 0.03 Archaeplastida
AT3G11250 No alias Ribosomal protein L10 family protein 0.04 Archaeplastida
Cpa|evm.model.tig00000615.69 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 Archaeplastida
GSVIVT01016313001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 Archaeplastida
GSVIVT01032857001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 Archaeplastida
LOC_Os08g03640.1 No alias component RPP0 of LSU proteome component 0.05 Archaeplastida
LOC_Os12g03880.1 No alias component RPP0 of LSU proteome component 0.03 Archaeplastida
MA_10433058g0020 No alias component RPP0 of LSU proteome component 0.02 Archaeplastida
Mp1g07120.1 No alias component RPP0 of LSU proteome component 0.05 Archaeplastida
Solyc05g054580.3.1 No alias component RPP0 of LSU proteome component 0.02 Archaeplastida
Zm00001e021786_P001 No alias component RPP0 of LSU proteome component 0.03 Archaeplastida
Zm00001e029292_P001 No alias component RPP0 of LSU proteome component 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
CC GO:0031968 organelle outer membrane IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!