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  5. AT2G14860

AT2G14860


Description : Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein


Gene families : OG0003610 (Archaeplastida) Phylogenetic Tree(s): OG0003610_tree ,
OG_05_0003406 (LandPlants) Phylogenetic Tree(s): OG_05_0003406_tree ,
OG_06_0003325 (SeedPlants) Phylogenetic Tree(s): OG_06_0003325_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G14860
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00144p00007850 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005778 peroxisomal membrane ISS Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
CC GO:0000785 chromatin IEP Neighborhood
CC GO:0000790 nuclear chromatin IEP Neighborhood
CC GO:0000792 heterochromatin IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005685 U1 snRNP IEP Neighborhood
CC GO:0005720 nuclear heterochromatin IEP Neighborhood
CC GO:0005730 nucleolus IEP Neighborhood
CC GO:0005732 small nucleolar ribonucleoprotein complex IEP Neighborhood
CC GO:0005829 cytosol IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006730 one-carbon metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
MF GO:0008327 methyl-CpG binding IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0009909 regulation of flower development IEP Neighborhood
MF GO:0009982 pseudouridine synthase activity IEP Neighborhood
CC GO:0010369 chromocenter IEP Neighborhood
CC GO:0010370 perinucleolar chromocenter IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
CC GO:0016272 prefoldin complex IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
MF GO:0043621 protein self-association IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
CC GO:0097525 spliceosomal snRNP complex IEP Neighborhood
CC GO:0098687 chromosomal region IEP Neighborhood
CC GO:0120114 Sm-like protein family complex IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR007248 Mpv17_PMP22 179 238
No external refs found!