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  5. Gb_00289

Gb_00289


Description : sporopollenin precursor exporter. subfamily ABCG transporter


Gene families : OG0000388 (Archaeplastida) Phylogenetic Tree(s): OG0000388_tree ,
OG_05_0006265 (LandPlants) Phylogenetic Tree(s): OG_05_0006265_tree ,
OG_06_0007820 (SeedPlants) Phylogenetic Tree(s): OG_06_0007820_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_00289
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00187570 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.04 Archaeplastida
AMTR_s00134p00069640 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.02 Archaeplastida
AT3G13220 ABCG26, WBC27 ABC-2 type transporter family protein 0.04 Archaeplastida
AT4G27420 No alias ABC-2 type transporter family protein 0.03 Archaeplastida
Cpa|evm.model.tig00001130.22 No alias ABC transporter G family member 22 OS=Arabidopsis thaliana 0.02 Archaeplastida
Cre17.g717050 No alias ABC transporter G family member 21 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01014402001 No alias Solute transport.primary active transport.ABC... 0.05 Archaeplastida
GSVIVT01014733001 No alias Solute transport.primary active transport.ABC... 0.06 Archaeplastida
LOC_Os06g40550.1 No alias sporopollenin precursor exporter. subfamily ABCG transporter 0.03 Archaeplastida
LOC_Os11g07600.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
MA_10101g0010 No alias subfamily ABCG transporter 0.04 Archaeplastida
Solyc07g065780.2.1 No alias ABC transporter G family member 26 OS=Arabidopsis... 0.03 Archaeplastida
Solyc12g013630.1.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
Zm00001e037432_P001 No alias sporopollenin precursor exporter. subfamily ABCG transporter 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 116 267
IPR013525 ABC_2_trans 423 632
No external refs found!