Gb_00290


Description : component RPL4 of LSU proteome component


Gene families : OG0002429 (Archaeplastida) Phylogenetic Tree(s): OG0002429_tree ,
OG_05_0002329 (LandPlants) Phylogenetic Tree(s): OG_05_0002329_tree ,
OG_06_0002237 (SeedPlants) Phylogenetic Tree(s): OG_06_0002237_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_00290
Cluster HCCA: Cluster_212

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00210590 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 Archaeplastida
AT3G09630 No alias Ribosomal protein L4/L1 family 0.02 Archaeplastida
AT5G02870 No alias Ribosomal protein L4/L1 family 0.02 Archaeplastida
Cpa|evm.model.tig00022075.53 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 Archaeplastida
LOC_Os03g58204.1 No alias component RPL4 of LSU proteome component 0.02 Archaeplastida
LOC_Os07g08330.1 No alias component RPL4 of LSU proteome component 0.02 Archaeplastida
Mp4g20310.1 No alias component RPL4 of LSU proteome component 0.01 Archaeplastida
Solyc10g084350.2.1 No alias component RPL4 of LSU proteome component 0.02 Archaeplastida
Zm00001e005988_P001 No alias component RPL4 of LSU proteome component 0.02 Archaeplastida
Zm00001e011456_P002 No alias component RPL4 of LSU proteome component 0.02 Archaeplastida
Zm00001e011869_P001 No alias component RPL4 of LSU proteome component 0.04 Archaeplastida
Zm00001e032938_P001 No alias component RPL4 of LSU proteome component 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
InterPro domains Description Start Stop
IPR025755 Ribos_L4_C_dom 276 349
IPR002136 Ribosomal_L4/L1e 23 263
No external refs found!