1. Home
  2. Species
  3. Gingko biloba
  4. Sequence
  5. Gb_00409

Gb_00409


Description : RNA editing factor (SLO2)


Gene families : OG0011027 (Archaeplastida) Phylogenetic Tree(s): OG0011027_tree ,
OG_05_0010980 (LandPlants) Phylogenetic Tree(s): OG_05_0010980_tree ,
OG_06_0010967 (SeedPlants) Phylogenetic Tree(s): OG_06_0010967_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_00409
Cluster HCCA: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01000936001 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.05 Archaeplastida
LOC_Os04g35610.1 No alias RNA editing factor (SLO2) 0.03 Archaeplastida
MA_35442g0010 No alias RNA editing factor (SLO2) 0.09 Archaeplastida
Solyc04g009000.1.1 No alias RNA editing factor (SLO2) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 478 525
IPR002885 Pentatricopeptide_repeat 138 185
IPR002885 Pentatricopeptide_repeat 238 286
IPR002885 Pentatricopeptide_repeat 370 418
IPR002885 Pentatricopeptide_repeat 621 647
IPR002885 Pentatricopeptide_repeat 553 576
IPR002885 Pentatricopeptide_repeat 314 340
IPR002885 Pentatricopeptide_repeat 452 477
IPR002885 Pentatricopeptide_repeat 79 106
IPR032867 DYW_dom 651 775
IPR002885 Pentatricopeptide_repeat 107 134
No external refs found!