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  5. Gb_00532

Gb_00532


Description : no hits & (original description: none)


Gene families : OG0006972 (Archaeplastida) Phylogenetic Tree(s): OG0006972_tree ,
OG_05_0007680 (LandPlants) Phylogenetic Tree(s): OG_05_0007680_tree ,
OG_06_0008621 (SeedPlants) Phylogenetic Tree(s): OG_06_0008621_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_00532
Cluster HCCA: Cluster_227

Target Alias Description ECC score Gene Family Method Actions
AT5G44710 No alias CONTAINS InterPro DOMAIN/s: Ribosomal protein S27/S33,... 0.04 Archaeplastida
LOC_Os05g05560.1 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005672 transcription factor TFIIA complex IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
InterPro domains Description Start Stop
IPR013219 Ribosomal_S27/S33_mit 60 136
No external refs found!