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  5. Gb_00671

Gb_00671


Description : UPF0496 protein At3g49070 OS=Arabidopsis thaliana (sp|q9smu4|u496n_arath : 189.0)


Gene families : OG0002512 (Archaeplastida) Phylogenetic Tree(s): OG0002512_tree ,
OG_05_0001655 (LandPlants) Phylogenetic Tree(s): OG_05_0001655_tree ,
OG_06_0000925 (SeedPlants) Phylogenetic Tree(s): OG_06_0000925_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_00671
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
AT1G20180 No alias Protein of unknown function (DUF677) 0.07 Archaeplastida
AT3G49070 No alias Protein of unknown function (DUF677) 0.04 Archaeplastida
Gb_12696 No alias UPF0496 protein At3g19330 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os03g05440.1 No alias UPF0496 protein 3 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
MA_10114342g0010 No alias UPF0496 protein 3 OS=Oryza sativa subsp. indica... 0.02 Archaeplastida
Solyc04g071523.1.1 No alias UPF0496 protein At3g49070 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc12g056570.1.1 No alias UPF0496 protein At3g49070 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e013297_P001 No alias Putative UPF0496 protein 2 OS=Oryza sativa subsp. indica... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Neighborhood
BP GO:0000097 sulfur amino acid biosynthetic process IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Neighborhood
MF GO:0003993 acid phosphatase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0005199 structural constituent of cell wall IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006555 methionine metabolic process IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
MF GO:0008172 S-methyltransferase activity IEP Neighborhood
BP GO:0009066 aspartate family amino acid metabolic process IEP Neighborhood
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Neighborhood
BP GO:0009086 methionine biosynthetic process IEP Neighborhood
BP GO:0009664 plant-type cell wall organization IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0017025 TBP-class protein binding IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0030976 thiamine pyrophosphate binding IEP Neighborhood
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Neighborhood
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR007749 DUF677 71 376
No external refs found!