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Gb_00679


Description : Tetraspanin-8 OS=Arabidopsis thaliana (sp|q8s8q6|tet8_arath : 307.0)


Gene families : OG0000259 (Archaeplastida) Phylogenetic Tree(s): OG0000259_tree ,
OG_05_0000226 (LandPlants) Phylogenetic Tree(s): OG_05_0000226_tree ,
OG_06_0000242 (SeedPlants) Phylogenetic Tree(s): OG_06_0000242_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_00679
Cluster HCCA: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00197500 evm_27.TU.AmTr_v1... Protein TORNADO 2 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00101p00124120 evm_27.TU.AmTr_v1... Tetraspanin-2 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00108p00058320 evm_27.TU.AmTr_v1... Tetraspanin-6 OS=Arabidopsis thaliana 0.04 Archaeplastida
AT4G30430 TET9 tetraspanin9 0.02 Archaeplastida
GSVIVT01016305001 No alias Tetraspanin-5 OS=Arabidopsis thaliana 0.05 Archaeplastida
LOC_Os08g16050.1 No alias Tetraspanin-7 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os09g25760.1 No alias Tetraspanin-8 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_81058g0010 No alias Tetraspanin-8 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_909581g0010 No alias Tetraspanin-8 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c21_1270V3.1 No alias tetraspanin8 0.02 Archaeplastida
Solyc04g049080.4.1 No alias Tetraspanin-5 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc07g006280.3.1 No alias Tetraspanin-8 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc07g025510.4.1 No alias Tetraspanin-2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc11g072480.2.1 No alias Tetraspanin-3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e004417_P001 No alias Tetraspanin-10 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e028243_P001 No alias Tetraspanin-6 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e029484_P001 No alias Tetraspanin-6 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e029513_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e034206_P001 No alias Tetraspanin-8 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e039133_P001 No alias Protein TORNADO 2 OS=Arabidopsis thaliana... 0.05 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR018499 Tetraspanin/Peripherin 7 251
No external refs found!