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  5. Gb_00716

Gb_00716


Description : Short-chain dehydrogenase reductase 2a OS=Arabidopsis thaliana (sp|q9scu0|sdr2a_arath : 224.0)


Gene families : OG0000154 (Archaeplastida) Phylogenetic Tree(s): OG0000154_tree ,
OG_05_0000088 (LandPlants) Phylogenetic Tree(s): OG_05_0000088_tree ,
OG_06_0000092 (SeedPlants) Phylogenetic Tree(s): OG_06_0000092_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_00716

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01033915001 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.04 Archaeplastida
Gb_07560 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.05 Archaeplastida
Gb_17570 No alias Short-chain dehydrogenase reductase ATA1 OS=Arabidopsis... 0.03 Archaeplastida
Gb_35797 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 Archaeplastida
MA_107740g0010 No alias Short-chain dehydrogenase reductase ATA1 OS=Arabidopsis... 0.02 Archaeplastida
MA_289156g0010 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.06 Archaeplastida
Solyc01g005500.3.1 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!