Gb_00760

Description : methylation reader (MBD10-11)

Gene families : OG0003057 (Archaeplastida) Phylogenetic Tree(s): OG0003057_tree ,
OG_05_0002066 (LandPlants) Phylogenetic Tree(s): OG_05_0002066_tree ,
OG_06_0002151 (SeedPlants) Phylogenetic Tree(s): OG_06_0002151_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_00760
Cluster	HCCA: Cluster_235

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00004p00169140	evm_27.TU.AmTr_v1...	Methyl-CpG-binding domain-containing protein 11...	0.01	Archaeplastida
MA_46923g0010	No alias	methylation reader (MBD10-11)	0.02	Archaeplastida
MA_72639g0010	No alias	methylation reader (MBD10-11)	0.02	Archaeplastida
MA_75004g0010	No alias	methylation reader (MBD10-11)	0.02	Archaeplastida
Solyc12g009590.2.1	No alias	methylation reader (MBD10-11)	0.03	Archaeplastida
Zm00001e004995_P005	No alias	methylation reader (MBD10-11)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
CC	GO:0042025	host cell nucleus	IEA	Interproscan
CC	GO:0044217	other organism part	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0005634	nucleus	IEP	Neighborhood
BP	GO:0006325	chromatin organization	IEP	Neighborhood
BP	GO:0006334	nucleosome assembly	IEP	Neighborhood
BP	GO:0016043	cellular component organization	IEP	Neighborhood
BP	GO:0022607	cellular component assembly	IEP	Neighborhood
BP	GO:0034622	cellular protein-containing complex assembly	IEP	Neighborhood
BP	GO:0034728	nucleosome organization	IEP	Neighborhood
CC	GO:0043227	membrane-bounded organelle	IEP	Neighborhood
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Neighborhood
BP	GO:0043933	protein-containing complex subunit organization	IEP	Neighborhood
BP	GO:0065003	protein-containing complex assembly	IEP	Neighborhood
BP	GO:0065004	protein-DNA complex assembly	IEP	Neighborhood
BP	GO:0071824	protein-DNA complex subunit organization	IEP	Neighborhood
BP	GO:0071840	cellular component organization or biogenesis	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001739	Methyl_CpG_DNA-bd	218	268

External Links

No external refs found!