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Gb_00858


Description : Protein translocase subunit SecA, chloroplastic OS=Spinacia oleracea (sp|q36795|seca_spiol : 241.0)


Gene families : OG0001928 (Archaeplastida) Phylogenetic Tree(s): OG0001928_tree ,
OG_05_0028272 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0002620 (SeedPlants) Phylogenetic Tree(s): OG_06_0002620_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_00858
Cluster HCCA: Cluster_302

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00116920 evm_27.TU.AmTr_v1... Protein translocation.chloroplast.thylakoid membrane... 0.08 Archaeplastida
Cpa|evm.model.tig00000219.51 No alias Protein translocase subunit SecA, chloroplastic... 0.03 Archaeplastida
Cre12.g517900 No alias Protein translocation.chloroplast.thylakoid membrane... 0.04 Archaeplastida
GSVIVT01028249001 No alias Protein translocation.chloroplast.thylakoid membrane... 0.04 Archaeplastida
LOC_Os01g21820.1 No alias component SecA2 of inner envelope Sec2 post-import... 0.03 Archaeplastida
MA_304459g0010 No alias Protein translocase subunit SecA, chloroplastic... 0.04 Archaeplastida
Mp5g09750.1 No alias component SecA1 of thylakoid membrane Sec1 translocation system 0.02 Archaeplastida
Pp3c20_6050V3.1 No alias Albino or Glassy Yellow 1 0.07 Archaeplastida
Smo156007 No alias Protein translocation.chloroplast.thylakoid membrane... 0.02 Archaeplastida
Solyc01g080840.3.1 No alias component SecA1 of thylakoid membrane Sec1 translocation system 0.04 Archaeplastida
Zm00001e017535_P001 No alias component SecA1 of thylakoid membrane Sec1 translocation system 0.08 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0017038 protein import IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003746 translation elongation factor activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006414 translational elongation IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
InterPro domains Description Start Stop
IPR011115 SecA_DEAD 1 146
No external refs found!