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Gb_00906


Description : VAMP7-type R-type SNARE longin protein. non-SNARE-type phytolongin


Gene families : OG0003389 (Archaeplastida) Phylogenetic Tree(s): OG0003389_tree ,
OG_05_0002206 (LandPlants) Phylogenetic Tree(s): OG_05_0002206_tree ,
OG_06_0003810 (SeedPlants) Phylogenetic Tree(s): OG_06_0003810_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_00906
Cluster HCCA: Cluster_273

Target Alias Description ECC score Gene Family Method Actions
Pp3c8_14310V3.1 No alias vesicle-associated membrane protein 727 0.04 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007030 Golgi organization IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0035091 phosphatidylinositol binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001388 Synaptobrevin 196 285
IPR010908 Longin_dom 37 97
No external refs found!