- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : alpha-class expansin
Gene families : OG0000024 (Archaeplastida) Phylogenetic Tree(s): OG0000024_tree ,
OG_05_0000028 (LandPlants) Phylogenetic Tree(s): OG_05_0000028_tree ,
OG_06_0057890 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Gb_01048 | |
| Cluster | HCCA: Cluster_108 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00115760 | evm_27.TU.AmTr_v1... | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.06 | Archaeplastida | |
| AMTR_s00012p00230920 | evm_27.TU.AmTr_v1... | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.04 | Archaeplastida | |
| AMTR_s00119p00058870 | evm_27.TU.AmTr_v1... | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.06 | Archaeplastida | |
| AMTR_s00140p00077570 | evm_27.TU.AmTr_v1... | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.02 | Archaeplastida | |
| AT1G26770 | ATEXPA10,... | expansin A10 | 0.03 | Archaeplastida | |
| AT2G03090 | EXP15, ATEXPA15,... | expansin A15 | 0.06 | Archaeplastida | |
| AT2G28950 | EXPA6, ATEXP6,... | expansin A6 | 0.06 | Archaeplastida | |
| AT2G37640 | ATEXPA3, EXP3,... | Barwin-like endoglucanases superfamily protein | 0.04 | Archaeplastida | |
| AT2G40610 | EXPA8, ATHEXP... | expansin A8 | 0.02 | Archaeplastida | |
| AT4G01630 | ATHEXP ALPHA... | expansin A17 | 0.04 | Archaeplastida | |
| AT5G39290 | ATEXP26, ATHEXP... | expansin A26 | 0.04 | Archaeplastida | |
| AT5G56320 | ATEXP14, EXPA14,... | expansin A14 | 0.03 | Archaeplastida | |
| GSVIVT01011437001 | No alias | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.04 | Archaeplastida | |
| GSVIVT01016525001 | No alias | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.03 | Archaeplastida | |
| GSVIVT01029411001 | No alias | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.04 | Archaeplastida | |
| GSVIVT01032681001 | No alias | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.02 | Archaeplastida | |
| GSVIVT01032935001 | No alias | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.03 | Archaeplastida | |
| GSVIVT01035233001 | No alias | Expansin-A13 OS=Arabidopsis thaliana | 0.03 | Archaeplastida | |
| LOC_Os01g14660.1 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| LOC_Os01g16770.1 | No alias | alpha-class expansin | 0.02 | Archaeplastida | |
| LOC_Os02g16839.1 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| LOC_Os03g06000.1 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| LOC_Os03g06010.1 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| LOC_Os03g06020.1 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| LOC_Os03g21820.1 | No alias | alpha-class expansin | 0.04 | Archaeplastida | |
| LOC_Os04g15840.1 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| LOC_Os05g19600.1 | No alias | alpha-class expansin | 0.04 | Archaeplastida | |
| LOC_Os05g39990.1 | No alias | alpha-class expansin | 0.02 | Archaeplastida | |
| LOC_Os06g01920.1 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| LOC_Os10g30330.1 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| LOC_Os10g30340.1 | No alias | alpha-class expansin | 0.04 | Archaeplastida | |
| LOC_Os10g39110.1 | No alias | alpha-class expansin | 0.04 | Archaeplastida | |
| LOC_Os12g36040.1 | No alias | alpha-class expansin | 0.04 | Archaeplastida | |
| MA_100868g0010 | No alias | alpha-class expansin | 0.02 | Archaeplastida | |
| MA_10425823g0010 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| MA_130258g0010 | No alias | alpha-class expansin | 0.06 | Archaeplastida | |
| MA_14588g0010 | No alias | alpha-class expansin | 0.02 | Archaeplastida | |
| MA_172610g0010 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| MA_18265g0010 | No alias | alpha-class expansin | 0.02 | Archaeplastida | |
| MA_30127g0010 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| MA_3618g0010 | No alias | Expansin-A15 OS=Arabidopsis thaliana... | 0.02 | Archaeplastida | |
| MA_36587g0010 | No alias | alpha-class expansin | 0.04 | Archaeplastida | |
| MA_37884g0010 | No alias | alpha-class expansin | 0.04 | Archaeplastida | |
| MA_45587g0020 | No alias | alpha-class expansin | 0.07 | Archaeplastida | |
| MA_474624g0010 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| MA_4979g0010 | No alias | alpha-class expansin | 0.06 | Archaeplastida | |
| MA_6644365g0010 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| MA_70880g0010 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| MA_7218g0010 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
| MA_915221g0010 | No alias | alpha-class expansin | 0.02 | Archaeplastida | |
| MA_91602g0010 | No alias | Expansin-A2 OS=Oryza sativa subsp. japonica... | 0.05 | Archaeplastida | |
| Mp1g22730.1 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| Mp1g22740.1 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| Mp1g24230.1 | No alias | alpha-class expansin | 0.05 | Archaeplastida | |
| Mp2g18600.1 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| Mp3g06900.1 | No alias | alpha-class expansin | 0.04 | Archaeplastida | |
| Mp3g22690.1 | No alias | alpha-class expansin | 0.02 | Archaeplastida | |
| Mp5g01930.1 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| Mp5g20420.1 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| Pp3c12_4560V3.1 | No alias | expansin A9 | 0.04 | Archaeplastida | |
| Pp3c14_18450V3.1 | No alias | expansin A14 | 0.02 | Archaeplastida | |
| Pp3c18_19660V3.1 | No alias | expansin A9 | 0.04 | Archaeplastida | |
| Pp3c18_19720V3.1 | No alias | expansin A1 | 0.03 | Archaeplastida | |
| Pp3c20_5780V3.1 | No alias | expansin A15 | 0.08 | Archaeplastida | |
| Pp3c21_1850V3.1 | No alias | expansin A1 | 0.03 | Archaeplastida | |
| Pp3c21_1940V3.1 | No alias | expansin A9 | 0.02 | Archaeplastida | |
| Pp3c22_760V3.1 | No alias | expansin A1 | 0.04 | Archaeplastida | |
| Pp3c8_1320V3.1 | No alias | expansin A4 | 0.02 | Archaeplastida | |
| Pp3c8_14900V3.1 | No alias | expansin A14 | 0.03 | Archaeplastida | |
| Pp3c8_870V3.1 | No alias | expansin A1 | 0.02 | Archaeplastida | |
| Smo143857 | No alias | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.03 | Archaeplastida | |
| Smo230202 | No alias | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.02 | Archaeplastida | |
| Smo409954 | No alias | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.03 | Archaeplastida | |
| Smo90935 | No alias | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.03 | Archaeplastida | |
| Smo91129 | No alias | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.05 | Archaeplastida | |
| Smo95369 | No alias | Expansin-A10 OS=Arabidopsis thaliana | 0.03 | Archaeplastida | |
| Solyc02g081210.3.1 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| Solyc02g088100.3.1 | No alias | alpha-class expansin | 0.08 | Archaeplastida | |
| Solyc03g115890.3.1 | No alias | alpha-class expansin | 0.06 | Archaeplastida | |
| Solyc05g052250.3.1 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| Solyc06g076220.3.1 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| Solyc09g010860.4.1 | No alias | alpha-class expansin | 0.05 | Archaeplastida | |
| Solyc12g089380.2.1 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| Zm00001e003887_P001 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| Zm00001e003888_P001 | No alias | alpha-class expansin | 0.05 | Archaeplastida | |
| Zm00001e003889_P001 | No alias | alpha-class expansin | 0.05 | Archaeplastida | |
| Zm00001e004720_P001 | No alias | alpha-class expansin | 0.02 | Archaeplastida | |
| Zm00001e011741_P001 | No alias | alpha-class expansin | 0.04 | Archaeplastida | |
| Zm00001e038997_P001 | No alias | alpha-class expansin | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000160 | phosphorelay signal transduction system | IEP | Neighborhood |
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | Neighborhood |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | Neighborhood |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Neighborhood |
| MF | GO:0004568 | chitinase activity | IEP | Neighborhood |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | Neighborhood |
| BP | GO:0006022 | aminoglycan metabolic process | IEP | Neighborhood |
| BP | GO:0006026 | aminoglycan catabolic process | IEP | Neighborhood |
| BP | GO:0006030 | chitin metabolic process | IEP | Neighborhood |
| BP | GO:0006032 | chitin catabolic process | IEP | Neighborhood |
| BP | GO:0006040 | amino sugar metabolic process | IEP | Neighborhood |
| MF | GO:0016787 | hydrolase activity | IEP | Neighborhood |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Neighborhood |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | Neighborhood |
| BP | GO:0016998 | cell wall macromolecule catabolic process | IEP | Neighborhood |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | Neighborhood |
| BP | GO:0018208 | peptidyl-proline modification | IEP | Neighborhood |
| MF | GO:0030246 | carbohydrate binding | IEP | Neighborhood |
| BP | GO:0035556 | intracellular signal transduction | IEP | Neighborhood |
| BP | GO:0042737 | drug catabolic process | IEP | Neighborhood |
| BP | GO:0044036 | cell wall macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0046348 | amino sugar catabolic process | IEP | Neighborhood |
| BP | GO:1901071 | glucosamine-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:1901072 | glucosamine-containing compound catabolic process | IEP | Neighborhood |
| BP | GO:1901136 | carbohydrate derivative catabolic process | IEP | Neighborhood |
| BP | GO:1901565 | organonitrogen compound catabolic process | IEP | Neighborhood |
| No external refs found! |