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  5. Gb_01184

Gb_01184


Description : Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana (sp|q9lfl5|pp390_arath : 713.0)


Gene families : OG0009969 (Archaeplastida) Phylogenetic Tree(s): OG0009969_tree ,
OG_05_0056869 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0049815 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_01184
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
MA_205762g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 Archaeplastida
Smo109988 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 454 476
IPR002885 Pentatricopeptide_repeat 318 344
IPR002885 Pentatricopeptide_repeat 656 680
IPR002885 Pentatricopeptide_repeat 346 372
IPR002885 Pentatricopeptide_repeat 217 241
IPR002885 Pentatricopeptide_repeat 243 290
IPR002885 Pentatricopeptide_repeat 142 189
IPR002885 Pentatricopeptide_repeat 480 527
IPR002885 Pentatricopeptide_repeat 581 628
IPR002885 Pentatricopeptide_repeat 378 426
IPR032867 DYW_dom 754 878
No external refs found!