AT2G16390 (DMS1, DRD1, CHR35)


Aliases : DMS1, DRD1, CHR35

Description : SNF2 domain-containing protein / helicase domain-containing protein


Gene families : OG0000450 (Archaeplastida) Phylogenetic Tree(s): OG0000450_tree ,
OG_05_0001964 (LandPlants) Phylogenetic Tree(s): OG_05_0001964_tree ,
OG_06_0001705 (SeedPlants) Phylogenetic Tree(s): OG_06_0001705_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G16390
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
AT2G21450 CHR34 chromatin remodeling 34 0.04 Archaeplastida
GSVIVT01024225001 No alias Chromatin organisation.DNA methylation.canonical... 0.04 Archaeplastida
GSVIVT01024512001 No alias Protein CHROMATIN REMODELING 35 OS=Arabidopsis thaliana 0.06 Archaeplastida
LOC_Os02g43460.1 No alias RDR2-polymerase regulator protein CLSY3/4 0.03 Archaeplastida
LOC_Os05g32610.1 No alias RDR2-polymerase regulator protein CLSY3/4 0.03 Archaeplastida
LOC_Os06g14440.1 No alias chromatin remodeling factor (DRD1). component DRD1 of... 0.02 Archaeplastida
LOC_Os07g25390.1 No alias chromatin remodeling factor (DRD1). component DRD1 of... 0.04 Archaeplastida
MA_15897g0010 No alias RDR2-polymerase accessory protein (CLSY1/2) 0.06 Archaeplastida
Mp4g09280.1 No alias Protein CHROMATIN REMODELING 35 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Pp3c2_3510V3.1 No alias SNF2 domain-containing protein / helicase... 0.02 Archaeplastida
Solyc01g068297.1.1 No alias RDR2-polymerase regulator protein CLSY3/4 0.03 Archaeplastida
Solyc01g068320.3.1 No alias RDR2-polymerase regulator protein CLSY3/4 0.04 Archaeplastida
Solyc06g050510.3.1 No alias RDR2-polymerase accessory protein (CLSY1/2) 0.05 Archaeplastida
Zm00001e021774_P001 No alias chromatin remodeling factor (DRD1). component DRD1 of... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISS Interproscan
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0004386 helicase activity ISS Interproscan
MF GO:0005524 ATP binding ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006260 DNA replication RCA Interproscan
BP GO:0006306 DNA methylation IMP Interproscan
BP GO:0006306 DNA methylation RCA Interproscan
BP GO:0006342 chromatin silencing RCA Interproscan
BP GO:0007267 cell-cell signaling RCA Interproscan
BP GO:0008283 cell proliferation RCA Interproscan
BP GO:0009616 virus induced gene silencing RCA Interproscan
BP GO:0010050 vegetative phase change RCA Interproscan
BP GO:0010267 production of ta-siRNAs involved in RNA interference RCA Interproscan
BP GO:0016571 histone methylation RCA Interproscan
BP GO:0030422 production of siRNA involved in RNA interference IGI Interproscan
BP GO:0031047 gene silencing by RNA RCA Interproscan
BP GO:0035196 production of miRNAs involved in gene silencing by miRNA RCA Interproscan
BP GO:0050832 defense response to fungus IMP Interproscan
BP GO:0051567 histone H3-K9 methylation RCA Interproscan
Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Neighborhood
CC GO:0000418 RNA polymerase IV complex IEP Neighborhood
CC GO:0000419 RNA polymerase V complex IEP Neighborhood
BP GO:0000724 double-strand break repair via homologous recombination IEP Neighborhood
BP GO:0000725 recombinational repair IEP Neighborhood
CC GO:0000785 chromatin IEP Neighborhood
CC GO:0000790 nuclear chromatin IEP Neighborhood
CC GO:0000791 euchromatin IEP Neighborhood
CC GO:0000792 heterochromatin IEP Neighborhood
BP GO:0000911 cytokinesis by cell plate formation IEP Neighborhood
BP GO:0003006 developmental process involved in reproduction IEP Neighborhood
MF GO:0003724 RNA helicase activity IEP Neighborhood
MF GO:0003725 double-stranded RNA binding IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP Neighborhood
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0004819 glutamine-tRNA ligase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005719 nuclear euchromatin IEP Neighborhood
CC GO:0005720 nuclear heterochromatin IEP Neighborhood
CC GO:0005730 nucleolus IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0006275 regulation of DNA replication IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006302 double-strand break repair IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006346 methylation-dependent chromatin silencing IEP Neighborhood
BP GO:0006424 glutamyl-tRNA aminoacylation IEP Neighborhood
BP GO:0006482 protein demethylation IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007049 cell cycle IEP Neighborhood
BP GO:0007051 spindle organization IEP Neighborhood
BP GO:0007059 chromosome segregation IEP Neighborhood
BP GO:0007062 sister chromatid cohesion IEP Neighborhood
BP GO:0007389 pattern specification process IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
BP GO:0008214 protein dealkylation IEP Neighborhood
BP GO:0008300 isoprenoid catabolic process IEP Neighborhood
BP GO:0009685 gibberellin metabolic process IEP Neighborhood
BP GO:0009799 specification of symmetry IEP Neighborhood
BP GO:0009825 multidimensional cell growth IEP Neighborhood
BP GO:0009855 determination of bilateral symmetry IEP Neighborhood
MF GO:0009899 ent-kaurene synthase activity IEP Neighborhood
BP GO:0009909 regulation of flower development IEP Neighborhood
BP GO:0009910 negative regulation of flower development IEP Neighborhood
BP GO:0009933 meristem structural organization IEP Neighborhood
BP GO:0009956 radial pattern formation IEP Neighborhood
BP GO:0009957 epidermal cell fate specification IEP Neighborhood
BP GO:0010014 meristem initiation IEP Neighborhood
BP GO:0010016 shoot system morphogenesis IEP Neighborhood
BP GO:0010022 meristem determinacy IEP Neighborhood
BP GO:0010047 fruit dehiscence IEP Neighborhood
BP GO:0010051 xylem and phloem pattern formation IEP Neighborhood
BP GO:0010073 meristem maintenance IEP Neighborhood
BP GO:0010080 regulation of floral meristem growth IEP Neighborhood
BP GO:0010081 regulation of inflorescence meristem growth IEP Neighborhood
BP GO:0010228 vegetative to reproductive phase transition of meristem IEP Neighborhood
BP GO:0010262 somatic embryogenesis IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
BP GO:0010495 long-distance posttranscriptional gene silencing IEP Neighborhood
BP GO:0010582 floral meristem determinacy IEP Neighborhood
BP GO:0010608 posttranscriptional regulation of gene expression IEP Neighborhood
BP GO:0010639 negative regulation of organelle organization IEP Neighborhood
CC GO:0015030 Cajal body IEP Neighborhood
BP GO:0016101 diterpenoid metabolic process IEP Neighborhood
BP GO:0016103 diterpenoid catabolic process IEP Neighborhood
BP GO:0016115 terpenoid catabolic process IEP Neighborhood
BP GO:0016246 RNA interference IEP Neighborhood
BP GO:0016441 posttranscriptional gene silencing IEP Neighborhood
BP GO:0016444 somatic cell DNA recombination IEP Neighborhood
BP GO:0016577 histone demethylation IEP Neighborhood
CC GO:0016604 nuclear body IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
BP GO:0018345 protein palmitoylation IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0031048 chromatin silencing by small RNA IEP Neighborhood
BP GO:0031056 regulation of histone modification IEP Neighborhood
BP GO:0031057 negative regulation of histone modification IEP Neighborhood
BP GO:0031497 chromatin assembly IEP Neighborhood
BP GO:0031507 heterochromatin assembly IEP Neighborhood
BP GO:0031935 regulation of chromatin silencing IEP Neighborhood
BP GO:0031936 negative regulation of chromatin silencing IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0032506 cytokinetic process IEP Neighborhood
BP GO:0033043 regulation of organelle organization IEP Neighborhood
BP GO:0033044 regulation of chromosome organization IEP Neighborhood
BP GO:0033169 histone H3-K9 demethylation IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
CC GO:0034708 methyltransferase complex IEP Neighborhood
MF GO:0035064 methylated histone binding IEP Neighborhood
BP GO:0035065 regulation of histone acetylation IEP Neighborhood
BP GO:0035067 negative regulation of histone acetylation IEP Neighborhood
CC GO:0035097 histone methyltransferase complex IEP Neighborhood
BP GO:0035194 posttranscriptional gene silencing by RNA IEP Neighborhood
MF GO:0035197 siRNA binding IEP Neighborhood
BP GO:0035510 DNA dealkylation IEP Neighborhood
BP GO:0040030 regulation of molecular function, epigenetic IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
BP GO:0042447 hormone catabolic process IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
BP GO:0045132 meiotic chromosome segregation IEP Neighborhood
BP GO:0045487 gibberellin catabolic process IEP Neighborhood
BP GO:0045815 positive regulation of gene expression, epigenetic IEP Neighborhood
BP GO:0045857 negative regulation of molecular function, epigenetic IEP Neighborhood
CC GO:0048188 Set1C/COMPASS complex IEP Neighborhood
BP GO:0048449 floral organ formation IEP Neighborhood
BP GO:0048451 petal formation IEP Neighborhood
BP GO:0048453 sepal formation IEP Neighborhood
BP GO:0048522 positive regulation of cellular process IEP Neighborhood
BP GO:0048532 anatomical structure arrangement IEP Neighborhood
BP GO:0048577 negative regulation of short-day photoperiodism, flowering IEP Neighborhood
BP GO:0048580 regulation of post-embryonic development IEP Neighborhood
BP GO:0048581 negative regulation of post-embryonic development IEP Neighborhood
BP GO:0048587 regulation of short-day photoperiodism, flowering IEP Neighborhood
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP Neighborhood
BP GO:0048831 regulation of shoot system development IEP Neighborhood
BP GO:0050793 regulation of developmental process IEP Neighborhood
BP GO:0051093 negative regulation of developmental process IEP Neighborhood
BP GO:0051128 regulation of cellular component organization IEP Neighborhood
BP GO:0051129 negative regulation of cellular component organization IEP Neighborhood
BP GO:0051225 spindle assembly IEP Neighborhood
BP GO:0051239 regulation of multicellular organismal process IEP Neighborhood
BP GO:0051241 negative regulation of multicellular organismal process IEP Neighborhood
BP GO:0051258 protein polymerization IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
BP GO:0060860 regulation of floral organ abscission IEP Neighborhood
BP GO:0060862 negative regulation of floral organ abscission IEP Neighborhood
BP GO:0060867 fruit abscission IEP Neighborhood
BP GO:0060968 regulation of gene silencing IEP Neighborhood
BP GO:0060969 negative regulation of gene silencing IEP Neighborhood
MF GO:0061980 regulatory RNA binding IEP Neighborhood
BP GO:0070076 histone lysine demethylation IEP Neighborhood
BP GO:0070828 heterochromatin organization IEP Neighborhood
BP GO:0070919 production of siRNA involved in chromatin silencing by small RNA IEP Neighborhood
BP GO:0070925 organelle assembly IEP Neighborhood
BP GO:0070988 demethylation IEP Neighborhood
BP GO:0071365 cellular response to auxin stimulus IEP Neighborhood
BP GO:0080111 DNA demethylation IEP Neighborhood
BP GO:0080188 RNA-directed DNA methylation IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
BP GO:0098813 nuclear chromosome segregation IEP Neighborhood
MF GO:0140030 modification-dependent protein binding IEP Neighborhood
MF GO:0140034 methylation-dependent protein binding IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
BP GO:1901983 regulation of protein acetylation IEP Neighborhood
BP GO:1901984 negative regulation of protein acetylation IEP Neighborhood
BP GO:1902275 regulation of chromatin organization IEP Neighborhood
BP GO:1902410 mitotic cytokinetic process IEP Neighborhood
BP GO:1903046 meiotic cell cycle process IEP Neighborhood
BP GO:1903047 mitotic cell cycle process IEP Neighborhood
BP GO:1905268 negative regulation of chromatin organization IEP Neighborhood
BP GO:1905393 plant organ formation IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
BP GO:2000026 regulation of multicellular organismal development IEP Neighborhood
BP GO:2000028 regulation of photoperiodism, flowering IEP Neighborhood
BP GO:2000034 regulation of seed maturation IEP Neighborhood
BP GO:2000241 regulation of reproductive process IEP Neighborhood
BP GO:2000242 negative regulation of reproductive process IEP Neighborhood
BP GO:2000692 negative regulation of seed maturation IEP Neighborhood
BP GO:2000756 regulation of peptidyl-lysine acetylation IEP Neighborhood
BP GO:2000757 negative regulation of peptidyl-lysine acetylation IEP Neighborhood
BP GO:2001251 negative regulation of chromosome organization IEP Neighborhood
InterPro domains Description Start Stop
IPR000330 SNF2_N 370 550
IPR001650 Helicase_C 699 811
No external refs found!