Gb_01582


Description : Pentatricopeptide repeat-containing protein At4g26680, mitochondrial OS=Arabidopsis thaliana (sp|q9sz10|pp338_arath : 466.0)


Gene families : OG0000731 (Archaeplastida) Phylogenetic Tree(s): OG0000731_tree ,
OG_05_0000430 (LandPlants) Phylogenetic Tree(s): OG_05_0000430_tree ,
OG_06_0000220 (SeedPlants) Phylogenetic Tree(s): OG_06_0000220_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_01582
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AT1G19290 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Archaeplastida
AT4G26680 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.06 Archaeplastida
AT5G01110 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.07 Archaeplastida
AT5G40400 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Archaeplastida
AT5G59900 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Archaeplastida
GSVIVT01008360001 No alias Pentatricopeptide repeat-containing protein At5g40400... 0.03 Archaeplastida
GSVIVT01009638001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida
GSVIVT01010244001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida
GSVIVT01025017001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida
Gb_03214 No alias Putative pentatricopeptide repeat-containing protein... 0.04 Archaeplastida
Gb_29383 No alias Putative pentatricopeptide repeat-containing protein... 0.04 Archaeplastida
LOC_Os05g19390.1 No alias Putative pentatricopeptide repeat-containing protein... 0.02 Archaeplastida
MA_278706g0010 No alias Pentatricopeptide repeat-containing protein At2g15630,... 0.02 Archaeplastida
Solyc02g021270.3.1 No alias Putative pentatricopeptide repeat-containing protein... 0.06 Archaeplastida
Solyc11g073270.1.1 No alias Putative pentatricopeptide repeat-containing protein... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0042393 histone binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 419 444
IPR002885 Pentatricopeptide_repeat 449 496
IPR002885 Pentatricopeptide_repeat 274 322
IPR002885 Pentatricopeptide_repeat 204 253
IPR002885 Pentatricopeptide_repeat 345 393
No external refs found!