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Description : component TRM732 of TRM7-TRM732/TRM734 tRNA cytidine/guanosine-methyltransferase complex
Gene families : OG0006222 (Archaeplastida) Phylogenetic Tree(s): OG0006222_tree ,
OG_05_0065068 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0058665 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Gb_02096 | |
| Cluster | HCCA: Cluster_324 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00010p00258470 | evm_27.TU.AmTr_v1... | RNA processing.RNA modification.rRNA/tRNA... | 0.06 | Archaeplastida | |
| GSVIVT01011388001 | No alias | RNA processing.RNA modification.rRNA/tRNA... | 0.04 | Archaeplastida | |
| MA_177186g0010 | No alias | component TRM732 of TRM7-TRM732/TRM734 tRNA... | 0.04 | Archaeplastida | |
| Pp3c6_28730V3.1 | No alias | No annotation | 0.05 | Archaeplastida | |
| Smo74297 | No alias | RNA processing.RNA modification.rRNA/tRNA... | 0.03 | Archaeplastida | |
| Zm00001e040139_P001 | No alias | component TRM732 of TRM7-TRM732/TRM734 tRNA... | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Neighborhood |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Neighborhood |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003723 | RNA binding | IEP | Neighborhood |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| BP | GO:0006397 | mRNA processing | IEP | Neighborhood |
| BP | GO:0008380 | RNA splicing | IEP | Neighborhood |
| BP | GO:0016071 | mRNA metabolic process | IEP | Neighborhood |
| MF | GO:0017069 | snRNA binding | IEP | Neighborhood |
| MF | GO:0017070 | U6 snRNA binding | IEP | Neighborhood |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Neighborhood |
| MF | GO:0030623 | U5 snRNA binding | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR019442 | DUF2428_death-receptor-like | 54 | 151 |
| No external refs found! |