1. Home
  2. Species
  3. Gingko biloba
  4. Sequence
  5. Gb_02122

Gb_02122


Description : cyclin (CYCD)


Gene families : OG0000252 (Archaeplastida) Phylogenetic Tree(s): OG0000252_tree ,
OG_05_0000382 (LandPlants) Phylogenetic Tree(s): OG_05_0000382_tree ,
OG_06_0000715 (SeedPlants) Phylogenetic Tree(s): OG_06_0000715_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_02122
Cluster HCCA: Cluster_184

Target Alias Description ECC score Gene Family Method Actions
AT4G34160 CYCD3, CYCD3;1 CYCLIN D3;1 0.02 Archaeplastida
AT5G67260 CYCD3;2 CYCLIN D3;2 0.03 Archaeplastida
GSVIVT01009432001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.03 Archaeplastida
LOC_Os03g42070.1 No alias cyclin (CYCD) 0.02 Archaeplastida
LOC_Os09g02360.1 No alias cyclin (CYCD) 0.03 Archaeplastida
LOC_Os12g39830.1 No alias cyclin (CYCD) 0.03 Archaeplastida
MA_114375g0010 No alias cyclin (CYCD) 0.03 Archaeplastida
MA_93221g0010 No alias cyclin (CYCD) 0.05 Archaeplastida
Solyc05g051410.3.1 No alias cyclin (CYCD) 0.03 Archaeplastida
Zm00001e003084_P002 No alias cyclin (CYCD) 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0042025 host cell nucleus IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
InterPro domains Description Start Stop
IPR004367 Cyclin_C-dom 260 362
IPR006671 Cyclin_N 127 257
No external refs found!