Description : pectate lyase
Gene families : OG0000134 (Archaeplastida) Phylogenetic Tree(s): OG0000134_tree ,
OG_05_0000111 (LandPlants) Phylogenetic Tree(s): OG_05_0000111_tree ,
OG_06_0000097 (SeedPlants) Phylogenetic Tree(s): OG_06_0000097_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Gb_02248 | |
Cluster | HCCA: Cluster_108 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00014p00175040 | evm_27.TU.AmTr_v1... | Putative pectate lyase 2 OS=Arabidopsis thaliana | 0.03 | Archaeplastida | |
AMTR_s00039p00189000 | evm_27.TU.AmTr_v1... | Cell wall.pectin.modification and degradation.pectate lyase | 0.09 | Archaeplastida | |
AMTR_s00078p00106380 | evm_27.TU.AmTr_v1... | Cell wall.pectin.modification and degradation.pectate lyase | 0.02 | Archaeplastida | |
AMTR_s00120p00111300 | evm_27.TU.AmTr_v1... | Cell wall.pectin.modification and degradation.pectate lyase | 0.05 | Archaeplastida | |
AT1G04680 | No alias | Pectin lyase-like superfamily protein | 0.04 | Archaeplastida | |
AT1G14420 | AT59 | Pectate lyase family protein | 0.02 | Archaeplastida | |
AT1G67750 | No alias | Pectate lyase family protein | 0.05 | Archaeplastida | |
AT2G02720 | No alias | Pectate lyase family protein | 0.02 | Archaeplastida | |
AT3G07010 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
AT3G24670 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
AT4G24780 | No alias | Pectin lyase-like superfamily protein | 0.06 | Archaeplastida | |
AT5G15110 | No alias | Pectate lyase family protein | 0.02 | Archaeplastida | |
AT5G48900 | No alias | Pectin lyase-like superfamily protein | 0.04 | Archaeplastida | |
GSVIVT01011348001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.03 | Archaeplastida | |
GSVIVT01016209001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.04 | Archaeplastida | |
GSVIVT01024239001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.03 | Archaeplastida | |
GSVIVT01028548001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.04 | Archaeplastida | |
LOC_Os04g05050.1 | No alias | pectate lyase | 0.03 | Archaeplastida | |
LOC_Os06g38510.2 | No alias | pectate lyase | 0.02 | Archaeplastida | |
LOC_Os10g31910.1 | No alias | pectate lyase | 0.03 | Archaeplastida | |
MA_101171g0010 | No alias | pectate lyase | 0.07 | Archaeplastida | |
MA_103716g0010 | No alias | pectate lyase | 0.03 | Archaeplastida | |
MA_10426822g0020 | No alias | pectate lyase | 0.06 | Archaeplastida | |
MA_10430145g0030 | No alias | pectate lyase | 0.05 | Archaeplastida | |
MA_10437227g0010 | No alias | pectate lyase | 0.06 | Archaeplastida | |
MA_10437227g0030 | No alias | pectate lyase | 0.03 | Archaeplastida | |
MA_1164682g0010 | No alias | pectate lyase | 0.05 | Archaeplastida | |
MA_170547g0010 | No alias | pectate lyase | 0.05 | Archaeplastida | |
MA_204440g0010 | No alias | Enzyme classification.EC_4 lyases.EC_4.2 carbon-oxygen... | 0.06 | Archaeplastida | |
MA_476625g0010 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
MA_62112g0010 | No alias | pectate lyase | 0.03 | Archaeplastida | |
MA_66914g0010 | No alias | pectate lyase | 0.04 | Archaeplastida | |
MA_91467g0010 | No alias | pectate lyase | 0.03 | Archaeplastida | |
MA_91467g0020 | No alias | pectate lyase | 0.03 | Archaeplastida | |
MA_97947g0010 | No alias | pectate lyase | 0.05 | Archaeplastida | |
Mp3g01000.1 | No alias | pectate lyase | 0.03 | Archaeplastida | |
Mp8g00770.1 | No alias | pectate lyase | 0.03 | Archaeplastida | |
Pp3c10_20140V3.1 | No alias | Pectin lyase-like superfamily protein | 0.04 | Archaeplastida | |
Pp3c13_1640V3.1 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
Pp3c14_6710V3.1 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
Pp3c17_16370V3.1 | No alias | Pectin lyase-like superfamily protein | 0.05 | Archaeplastida | |
Pp3c1_10180V3.1 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
Pp3c1_10470V3.1 | No alias | Pectin lyase-like superfamily protein | 0.04 | Archaeplastida | |
Pp3c1_33130V3.1 | No alias | Pectin lyase-like superfamily protein | 0.05 | Archaeplastida | |
Pp3c1_35100V3.1 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
Pp3c1_4040V3.1 | No alias | Pectin lyase-like superfamily protein | 0.06 | Archaeplastida | |
Pp3c2_9460V3.1 | No alias | Pectate lyase family protein | 0.03 | Archaeplastida | |
Pp3c3_35190V3.1 | No alias | Pectin lyase-like superfamily protein | 0.04 | Archaeplastida | |
Solyc01g010740.4.1 | No alias | pectate lyase | 0.03 | Archaeplastida | |
Solyc02g080910.4.1 | No alias | pectate lyase | 0.02 | Archaeplastida | |
Solyc02g093580.4.1 | No alias | pectate lyase | 0.03 | Archaeplastida | |
Solyc03g058890.4.1 | No alias | pectate lyase | 0.02 | Archaeplastida | |
Solyc03g071570.3.1 | No alias | pectate lyase | 0.02 | Archaeplastida | |
Solyc05g007080.4.1 | No alias | pectate lyase | 0.02 | Archaeplastida | |
Solyc06g071840.3.1 | No alias | Probable pectate lyase 22 OS=Arabidopsis thaliana... | 0.04 | Archaeplastida | |
Solyc06g083580.4.1 | No alias | pectate lyase | 0.06 | Archaeplastida | |
Solyc09g008380.3.1 | No alias | pectate lyase | 0.05 | Archaeplastida | |
Solyc09g061890.3.1 | No alias | pectate lyase | 0.05 | Archaeplastida | |
Solyc11g008140.3.1 | No alias | pectate lyase | 0.03 | Archaeplastida | |
Zm00001e008755_P002 | No alias | pectate lyase | 0.03 | Archaeplastida | |
Zm00001e024959_P001 | No alias | pectate lyase | 0.03 | Archaeplastida | |
Zm00001e040624_P001 | No alias | pectate lyase | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000079 | regulation of cyclin-dependent protein serine/threonine kinase activity | IEP | Neighborhood |
BP | GO:0001932 | regulation of protein phosphorylation | IEP | Neighborhood |
MF | GO:0003674 | molecular_function | IEP | Neighborhood |
MF | GO:0003824 | catalytic activity | IEP | Neighborhood |
MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Neighborhood |
MF | GO:0005515 | protein binding | IEP | Neighborhood |
BP | GO:0005975 | carbohydrate metabolic process | IEP | Neighborhood |
MF | GO:0008168 | methyltransferase activity | IEP | Neighborhood |
MF | GO:0008171 | O-methyltransferase activity | IEP | Neighborhood |
MF | GO:0008289 | lipid binding | IEP | Neighborhood |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Neighborhood |
MF | GO:0016787 | hydrolase activity | IEP | Neighborhood |
MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Neighborhood |
BP | GO:0019220 | regulation of phosphate metabolic process | IEP | Neighborhood |
MF | GO:0019899 | enzyme binding | IEP | Neighborhood |
MF | GO:0019900 | kinase binding | IEP | Neighborhood |
MF | GO:0019901 | protein kinase binding | IEP | Neighborhood |
MF | GO:0030246 | carbohydrate binding | IEP | Neighborhood |
MF | GO:0030599 | pectinesterase activity | IEP | Neighborhood |
BP | GO:0031399 | regulation of protein modification process | IEP | Neighborhood |
BP | GO:0032268 | regulation of cellular protein metabolic process | IEP | Neighborhood |
BP | GO:0042325 | regulation of phosphorylation | IEP | Neighborhood |
BP | GO:0042545 | cell wall modification | IEP | Neighborhood |
BP | GO:0043549 | regulation of kinase activity | IEP | Neighborhood |
BP | GO:0045229 | external encapsulating structure organization | IEP | Neighborhood |
BP | GO:0045859 | regulation of protein kinase activity | IEP | Neighborhood |
BP | GO:0050790 | regulation of catalytic activity | IEP | Neighborhood |
BP | GO:0051174 | regulation of phosphorus metabolic process | IEP | Neighborhood |
BP | GO:0051246 | regulation of protein metabolic process | IEP | Neighborhood |
BP | GO:0051338 | regulation of transferase activity | IEP | Neighborhood |
BP | GO:0051726 | regulation of cell cycle | IEP | Neighborhood |
MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | Neighborhood |
BP | GO:0065009 | regulation of molecular function | IEP | Neighborhood |
BP | GO:0071554 | cell wall organization or biogenesis | IEP | Neighborhood |
BP | GO:0071555 | cell wall organization | IEP | Neighborhood |
BP | GO:0071900 | regulation of protein serine/threonine kinase activity | IEP | Neighborhood |
BP | GO:1904029 | regulation of cyclin-dependent protein kinase activity | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002022 | Pec_lyase | 168 | 351 |
No external refs found! |