Description : adenosine deaminases;RNA binding;RNA binding;adenosine deaminases

Gene families : OG0005586 (Archaeplastida) Phylogenetic Tree(s): OG0005586_tree ,
OG_05_0006410 (LandPlants) Phylogenetic Tree(s): OG_05_0006410_tree ,
OG_06_0007934 (SeedPlants) Phylogenetic Tree(s): OG_06_0007934_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AT1G01760
Cluster HCCA: Cluster_139

Target Alias Description ECC score Gene Family Method Actions
LOC_Os04g58690.1 No alias no description available(sp|f4hu58|tad1_arath : 284.0) 0.03 Archaeplastida
Smo424531 No alias No description available 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding ISS Interproscan
MF GO:0004000 adenosine deaminase activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006396 RNA processing ISS Interproscan
Type GO Term Name Evidence Source
BP GO:0000059 obsolete protein import into nucleus, docking IEP Neighborhood
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
CC GO:0005643 nuclear pore IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006402 mRNA catabolic process IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006470 protein dephosphorylation IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
MF GO:0008373 sialyltransferase activity IEP Neighborhood
BP GO:0009648 photoperiodism IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
BP GO:0019722 calcium-mediated signaling IEP Neighborhood
BP GO:0031123 RNA 3'-end processing IEP Neighborhood
BP GO:0034655 nucleobase-containing compound catabolic process IEP Neighborhood
BP GO:0042780 tRNA 3'-end processing IEP Neighborhood
MF GO:0042781 3'-tRNA processing endoribonuclease activity IEP Neighborhood
BP GO:0043628 ncRNA 3'-end processing IEP Neighborhood
BP GO:0048573 photoperiodism, flowering IEP Neighborhood
InterPro domains Description Start Stop
IPR002466 A_deamin 50 411
No external refs found!