Gb_02361


Description : component RPS23 of SSU proteome


Gene families : OG0001653 (Archaeplastida) Phylogenetic Tree(s): OG0001653_tree ,
OG_05_0002025 (LandPlants) Phylogenetic Tree(s): OG_05_0002025_tree ,
OG_06_0002565 (SeedPlants) Phylogenetic Tree(s): OG_06_0002565_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_02361
Cluster HCCA: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00204160 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.07 Archaeplastida
AT3G09680 No alias Ribosomal protein S12/S23 family protein 0.03 Archaeplastida
AT5G02960 No alias Ribosomal protein S12/S23 family protein 0.19 Archaeplastida
Cpa|evm.model.tig00001264.27 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.1 Archaeplastida
Cre12.g504200 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.19 Archaeplastida
GSVIVT01016341001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.11 Archaeplastida
GSVIVT01025120001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.15 Archaeplastida
GSVIVT01025626001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.12 Archaeplastida
LOC_Os01g61814.1 No alias component RPS23 of SSU proteome 0.17 Archaeplastida
LOC_Os03g60400.1 No alias component RPS23 of SSU proteome 0.15 Archaeplastida
MA_10436470g0020 No alias component RPS23 of SSU proteome 0.16 Archaeplastida
MA_19871g0020 No alias component RPS23 of SSU proteome 0.09 Archaeplastida
MA_9043057g0010 No alias component RPS23 of SSU proteome 0.09 Archaeplastida
Mp2g08680.1 No alias component RPS23 of SSU proteome 0.22 Archaeplastida
Pp3c11_11070V3.1 No alias Ribosomal protein S12/S23 family protein 0.16 Archaeplastida
Pp3c12_25120V3.1 No alias Ribosomal protein S12/S23 family protein 0.12 Archaeplastida
Pp3c2_24130V3.1 No alias Ribosomal protein S12/S23 family protein 0.17 Archaeplastida
Pp3c4_3120V3.1 No alias Ribosomal protein S12/S23 family protein 0.13 Archaeplastida
Pp3c7_14200V3.1 No alias Ribosomal protein S12/S23 family protein 0.13 Archaeplastida
Smo145246 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.07 Archaeplastida
Solyc06g005110.3.1 No alias 40S ribosomal protein S23 OS=Fragaria ananassa... 0.03 Archaeplastida
Solyc09g007350.3.1 No alias component RPS23 of SSU proteome 0.16 Archaeplastida
Solyc10g084310.2.1 No alias component RPS23 of SSU proteome 0.13 Archaeplastida
Solyc10g086020.3.1 No alias component RPS23 of SSU proteome 0.2 Archaeplastida
Zm00001e006170_P001 No alias component RPS23 of SSU proteome 0.16 Archaeplastida
Zm00001e011770_P001 No alias component RPS23 of SSU proteome 0.13 Archaeplastida
Zm00001e019377_P001 No alias component RPS23 of SSU proteome 0.18 Archaeplastida
Zm00001e027265_P001 No alias component RPS23 of SSU proteome 0.12 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
MF GO:0008097 5S rRNA binding IEP Neighborhood
BP GO:0008202 steroid metabolic process IEP Neighborhood
BP GO:0009555 pollen development IEP Neighborhood
BP GO:0016125 sterol metabolic process IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016863 intramolecular oxidoreductase activity, transposing C=C bonds IEP Neighborhood
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
CC GO:0031968 organelle outer membrane IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
MF GO:0047750 cholestenol delta-isomerase activity IEP Neighborhood
BP GO:0048229 gametophyte development IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006032 Ribosomal_S12/S23 31 141
No external refs found!