Description : component RPS23 of SSU proteome
Gene families : OG0001653 (Archaeplastida) Phylogenetic Tree(s): OG0001653_tree ,
OG_05_0002025 (LandPlants) Phylogenetic Tree(s): OG_05_0002025_tree ,
OG_06_0002565 (SeedPlants) Phylogenetic Tree(s): OG_06_0002565_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Gb_02361 | |
Cluster | HCCA: Cluster_129 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00058p00204160 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.07 | Archaeplastida | |
AT3G09680 | No alias | Ribosomal protein S12/S23 family protein | 0.03 | Archaeplastida | |
AT5G02960 | No alias | Ribosomal protein S12/S23 family protein | 0.19 | Archaeplastida | |
Cpa|evm.model.tig00001264.27 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.1 | Archaeplastida | |
Cre12.g504200 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.19 | Archaeplastida | |
GSVIVT01016341001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.11 | Archaeplastida | |
GSVIVT01025120001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.15 | Archaeplastida | |
GSVIVT01025626001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.12 | Archaeplastida | |
LOC_Os01g61814.1 | No alias | component RPS23 of SSU proteome | 0.17 | Archaeplastida | |
LOC_Os03g60400.1 | No alias | component RPS23 of SSU proteome | 0.15 | Archaeplastida | |
MA_10436470g0020 | No alias | component RPS23 of SSU proteome | 0.16 | Archaeplastida | |
MA_19871g0020 | No alias | component RPS23 of SSU proteome | 0.09 | Archaeplastida | |
MA_9043057g0010 | No alias | component RPS23 of SSU proteome | 0.09 | Archaeplastida | |
Mp2g08680.1 | No alias | component RPS23 of SSU proteome | 0.22 | Archaeplastida | |
Pp3c11_11070V3.1 | No alias | Ribosomal protein S12/S23 family protein | 0.16 | Archaeplastida | |
Pp3c12_25120V3.1 | No alias | Ribosomal protein S12/S23 family protein | 0.12 | Archaeplastida | |
Pp3c2_24130V3.1 | No alias | Ribosomal protein S12/S23 family protein | 0.17 | Archaeplastida | |
Pp3c4_3120V3.1 | No alias | Ribosomal protein S12/S23 family protein | 0.13 | Archaeplastida | |
Pp3c7_14200V3.1 | No alias | Ribosomal protein S12/S23 family protein | 0.13 | Archaeplastida | |
Smo145246 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.07 | Archaeplastida | |
Solyc06g005110.3.1 | No alias | 40S ribosomal protein S23 OS=Fragaria ananassa... | 0.03 | Archaeplastida | |
Solyc09g007350.3.1 | No alias | component RPS23 of SSU proteome | 0.16 | Archaeplastida | |
Solyc10g084310.2.1 | No alias | component RPS23 of SSU proteome | 0.13 | Archaeplastida | |
Solyc10g086020.3.1 | No alias | component RPS23 of SSU proteome | 0.2 | Archaeplastida | |
Zm00001e006170_P001 | No alias | component RPS23 of SSU proteome | 0.16 | Archaeplastida | |
Zm00001e011770_P001 | No alias | component RPS23 of SSU proteome | 0.13 | Archaeplastida | |
Zm00001e019377_P001 | No alias | component RPS23 of SSU proteome | 0.18 | Archaeplastida | |
Zm00001e027265_P001 | No alias | component RPS23 of SSU proteome | 0.12 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000049 | tRNA binding | IEP | Neighborhood |
MF | GO:0003723 | RNA binding | IEP | Neighborhood |
MF | GO:0004298 | threonine-type endopeptidase activity | IEP | Neighborhood |
CC | GO:0005741 | mitochondrial outer membrane | IEP | Neighborhood |
CC | GO:0005839 | proteasome core complex | IEP | Neighborhood |
BP | GO:0007275 | multicellular organism development | IEP | Neighborhood |
MF | GO:0008097 | 5S rRNA binding | IEP | Neighborhood |
BP | GO:0008202 | steroid metabolic process | IEP | Neighborhood |
BP | GO:0009555 | pollen development | IEP | Neighborhood |
BP | GO:0016125 | sterol metabolic process | IEP | Neighborhood |
MF | GO:0016860 | intramolecular oxidoreductase activity | IEP | Neighborhood |
MF | GO:0016863 | intramolecular oxidoreductase activity, transposing C=C bonds | IEP | Neighborhood |
CC | GO:0019773 | proteasome core complex, alpha-subunit complex | IEP | Neighborhood |
MF | GO:0019843 | rRNA binding | IEP | Neighborhood |
CC | GO:0019867 | outer membrane | IEP | Neighborhood |
CC | GO:0031090 | organelle membrane | IEP | Neighborhood |
CC | GO:0031966 | mitochondrial membrane | IEP | Neighborhood |
CC | GO:0031968 | organelle outer membrane | IEP | Neighborhood |
BP | GO:0032501 | multicellular organismal process | IEP | Neighborhood |
BP | GO:0032502 | developmental process | IEP | Neighborhood |
MF | GO:0047750 | cholestenol delta-isomerase activity | IEP | Neighborhood |
BP | GO:0048229 | gametophyte development | IEP | Neighborhood |
BP | GO:0048856 | anatomical structure development | IEP | Neighborhood |
MF | GO:0070003 | threonine-type peptidase activity | IEP | Neighborhood |
CC | GO:0098588 | bounding membrane of organelle | IEP | Neighborhood |
CC | GO:0098805 | whole membrane | IEP | Neighborhood |
BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR006032 | Ribosomal_S12/S23 | 31 | 141 |
No external refs found! |