Gb_02375

Description : RNA editing factor (MEF19)

Gene families : OG0008251 (Archaeplastida) Phylogenetic Tree(s): OG0008251_tree ,
OG_05_0060575 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0053833 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_02375
Cluster	HCCA: Cluster_104

Target	Alias	Description	ECC score	Gene Family Method
Gb_08051	No alias	Pentatricopeptide repeat-containing protein At5g16860...	0.1	Archaeplastida
MA_56660g0010	No alias	Pentatricopeptide repeat-containing protein At2g13600...	0.03	Archaeplastida
MA_597g0020	No alias	Pentatricopeptide repeat-containing protein At4g02750...	0.06	Archaeplastida
Smo71785	No alias	Pentatricopeptide repeat-containing protein At2g13600...	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	144	191
IPR002885	Pentatricopeptide_repeat	447	494
IPR002885	Pentatricopeptide_repeat	245	292
IPR002885	Pentatricopeptide_repeat	345	393
IPR002885	Pentatricopeptide_repeat	220	244
IPR032867	DYW_dom	621	744

External Links

No external refs found!

Gb_02375

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation