Description : cohesin cofactor (PDS5)
Gene families : OG0000410 (Archaeplastida) Phylogenetic Tree(s): OG0000410_tree ,
OG_05_0022086 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0021483 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Gb_02487 | |
Cluster | HCCA: Cluster_324 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00061p00213120 | evm_27.TU.AmTr_v1... | Cell cycle.mitosis and meiosis.sister chromatid... | 0.03 | Archaeplastida | |
AT1G77600 | No alias | ARM repeat superfamily protein | 0.04 | Archaeplastida | |
AT4G31880 | No alias | LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 24 plant... | 0.04 | Archaeplastida | |
AT5G47690 | No alias | binding | 0.05 | Archaeplastida | |
Cpa|evm.model.tig00000076.96 | No alias | No description available | 0.01 | Archaeplastida | |
GSVIVT01023587001 | No alias | Cell cycle.mitosis and meiosis.sister chromatid... | 0.03 | Archaeplastida | |
GSVIVT01035890001 | No alias | Cell cycle.mitosis and meiosis.sister chromatid... | 0.04 | Archaeplastida | |
MA_10433886g0010 | No alias | cohesin cofactor (PDS5) | 0.04 | Archaeplastida | |
MA_10434304g0010 | No alias | cohesin cofactor (PDS5) | 0.02 | Archaeplastida | |
MA_10434588g0010 | No alias | cohesin cofactor (PDS5) | 0.03 | Archaeplastida | |
MA_25261g0010 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
Pp3c10_24900V3.1 | No alias | binding | 0.02 | Archaeplastida | |
Pp3c23_10270V3.1 | No alias | binding | 0.04 | Archaeplastida | |
Solyc06g065710.3.1 | No alias | cohesin cofactor (PDS5) | 0.04 | Archaeplastida | |
Solyc11g012770.2.1 | No alias | cohesin cofactor (PDS5) | 0.04 | Archaeplastida | |
Zm00001e015094_P002 | No alias | cohesin cofactor (PDS5) | 0.03 | Archaeplastida | |
Zm00001e030989_P001 | No alias | cohesin cofactor (PDS5) | 0.04 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
MF | GO:0004197 | cysteine-type endopeptidase activity | IEP | Neighborhood |
MF | GO:0004198 | calcium-dependent cysteine-type endopeptidase activity | IEP | Neighborhood |
MF | GO:0004819 | glutamine-tRNA ligase activity | IEP | Neighborhood |
MF | GO:0004843 | thiol-dependent ubiquitin-specific protease activity | IEP | Neighborhood |
MF | GO:0005488 | binding | IEP | Neighborhood |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0006396 | RNA processing | IEP | Neighborhood |
BP | GO:0006425 | glutaminyl-tRNA aminoacylation | IEP | Neighborhood |
BP | GO:0006508 | proteolysis | IEP | Neighborhood |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
MF | GO:0008233 | peptidase activity | IEP | Neighborhood |
MF | GO:0008234 | cysteine-type peptidase activity | IEP | Neighborhood |
BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
BP | GO:0016579 | protein deubiquitination | IEP | Neighborhood |
BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
MF | GO:0070011 | peptidase activity, acting on L-amino acid peptides | IEP | Neighborhood |
BP | GO:0070646 | protein modification by small protein removal | IEP | Neighborhood |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
No InterPro domains available for this sequence
No external refs found! |