Gb_02544


Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana (sp|q9sy02|pp301_arath : 759.0)


Gene families : OG0009320 (Archaeplastida) Phylogenetic Tree(s): OG0009320_tree ,
OG_05_0065270 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0058881 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_02544
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
MA_51694g0010 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.02 Archaeplastida
MA_733561g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.12 Archaeplastida
MA_9392719g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.06 Archaeplastida
Smo114102 No alias Pentatricopeptide repeat-containing protein At5g27110... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 218 249
IPR002885 Pentatricopeptide_repeat 250 282
IPR002885 Pentatricopeptide_repeat 475 522
IPR002885 Pentatricopeptide_repeat 373 419
IPR032867 DYW_dom 649 772
IPR002885 Pentatricopeptide_repeat 98 126
IPR002885 Pentatricopeptide_repeat 549 570
IPR002885 Pentatricopeptide_repeat 159 189
IPR002885 Pentatricopeptide_repeat 314 343
IPR002885 Pentatricopeptide_repeat 283 313
IPR002885 Pentatricopeptide_repeat 128 158
No external refs found!