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  5. Gb_02796

Gb_02796


Description : actin-depolymerizing factor


Gene families : OG0000480 (Archaeplastida) Phylogenetic Tree(s): OG0000480_tree ,
OG_05_0000447 (LandPlants) Phylogenetic Tree(s): OG_05_0000447_tree ,
OG_06_0002111 (SeedPlants) Phylogenetic Tree(s): OG_06_0002111_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_02796
Cluster HCCA: Cluster_206

Target Alias Description ECC score Gene Family Method Actions
AT3G46010 ATADF1, ADF1, atadf actin depolymerizing factor 1 0.03 Archaeplastida
AT4G25590 ADF7 actin depolymerizing factor 7 0.03 Archaeplastida
AT5G52360 ADF10 actin depolymerizing factor 10 0.03 Archaeplastida
LOC_Os03g13950.1 No alias actin-depolymerizing factor 0.03 Archaeplastida
LOC_Os03g60580.1 No alias actin-depolymerizing factor 0.02 Archaeplastida
LOC_Os04g46910.1 No alias actin-depolymerizing factor 0.03 Archaeplastida
LOC_Os07g30090.2 No alias actin-depolymerizing factor 0.02 Archaeplastida
MA_76641g0010 No alias actin-depolymerizing factor 0.05 Archaeplastida
Mp2g12970.1 No alias actin-depolymerizing factor 0.05 Archaeplastida
Mp3g20570.1 No alias actin-depolymerizing factor 0.03 Archaeplastida
Mp8g17810.1 No alias actin-depolymerizing factor 0.04 Archaeplastida
Solyc06g005360.3.1 No alias actin-depolymerizing factor 0.03 Archaeplastida
Solyc09g010440.3.1 No alias actin-depolymerizing factor 0.04 Archaeplastida
Zm00001e001010_P001 No alias actin-depolymerizing factor 0.03 Archaeplastida
Zm00001e011754_P001 No alias actin-depolymerizing factor 0.04 Archaeplastida
Zm00001e011928_P002 No alias actin-depolymerizing factor 0.03 Archaeplastida
Zm00001e015357_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEP Neighborhood
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Neighborhood
BP GO:0006099 tricarboxylic acid cycle IEP Neighborhood
BP GO:0006101 citrate metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006914 autophagy IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0015977 carbon fixation IEP Neighborhood
BP GO:0016197 endosomal transport IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
BP GO:0016999 antibiotic metabolic process IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP Neighborhood
CC GO:0036452 ESCRT complex IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044440 endosomal part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Neighborhood
BP GO:0061919 process utilizing autophagic mechanism IEP Neighborhood
BP GO:0071985 multivesicular body sorting pathway IEP Neighborhood
BP GO:0072350 tricarboxylic acid metabolic process IEP Neighborhood
CC GO:1902554 serine/threonine protein kinase complex IEP Neighborhood
CC GO:1902911 protein kinase complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
CC GO:1990316 Atg1/ULK1 kinase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR002108 ADF-H 18 140
No external refs found!