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  5. AT1G08700

AT1G08700 (PS1)


Aliases : PS1

Description : Presenilin-1


Gene families : OG0002394 (Archaeplastida) Phylogenetic Tree(s): OG0002394_tree ,
OG_05_0002530 (LandPlants) Phylogenetic Tree(s): OG_05_0002530_tree ,
OG_06_0001681 (SeedPlants) Phylogenetic Tree(s): OG_06_0001681_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G08700
Cluster HCCA: Cluster_242

Target Alias Description ECC score Gene Family Method Actions
Gb_33523 No alias catalytic component PS of gamma secretase complex 0.02 Archaeplastida
Zm00001e017375_P001 No alias catalytic component PS of gamma secretase complex 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IBA Interproscan
CC GO:0005887 integral component of plasma membrane IBA Interproscan
BP GO:0008152 metabolic process IBA Interproscan
CC GO:0016020 membrane ISS Interproscan
BP GO:0019722 calcium-mediated signaling RCA Interproscan
BP GO:0035556 intracellular signal transduction ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000082 G1/S transition of mitotic cell cycle IEP Neighborhood
BP GO:0000226 microtubule cytoskeleton organization IEP Neighborhood
BP GO:0000902 cell morphogenesis IEP Neighborhood
BP GO:0000904 cell morphogenesis involved in differentiation IEP Neighborhood
MF GO:0001067 regulatory region nucleic acid binding IEP Neighborhood
BP GO:0003006 developmental process involved in reproduction IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
MF GO:0004722 protein serine/threonine phosphatase activity IEP Neighborhood
MF GO:0004766 spermidine synthase activity IEP Neighborhood
MF GO:0004845 uracil phosphoribosyltransferase activity IEP Neighborhood
MF GO:0004849 uridine kinase activity IEP Neighborhood
MF GO:0005384 manganese ion transmembrane transporter activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005677 chromatin silencing complex IEP Neighborhood
CC GO:0005819 spindle IEP Neighborhood
CC GO:0005829 cytosol IEP Neighborhood
BP GO:0006109 regulation of carbohydrate metabolic process IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Neighborhood
BP GO:0006222 UMP biosynthetic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006261 DNA-dependent DNA replication IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006349 regulation of gene expression by genetic imprinting IEP Neighborhood
BP GO:0006405 RNA export from nucleus IEP Neighborhood
BP GO:0006406 mRNA export from nucleus IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006596 polyamine biosynthetic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006828 manganese ion transport IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0006997 nucleus organization IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007015 actin filament organization IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007031 peroxisome organization IEP Neighborhood
BP GO:0007155 cell adhesion IEP Neighborhood
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Neighborhood
BP GO:0008216 spermidine metabolic process IEP Neighborhood
CC GO:0008290 F-actin capping protein complex IEP Neighborhood
BP GO:0008295 spermidine biosynthetic process IEP Neighborhood
BP GO:0008360 regulation of cell shape IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0008655 pyrimidine-containing compound salvage IEP Neighborhood
MF GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
BP GO:0009119 ribonucleoside metabolic process IEP Neighborhood
BP GO:0009129 pyrimidine nucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009130 pyrimidine nucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009163 nucleoside biosynthetic process IEP Neighborhood
BP GO:0009173 pyrimidine ribonucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009174 pyrimidine ribonucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009309 amine biosynthetic process IEP Neighborhood
BP GO:0009314 response to radiation IEP Neighborhood
BP GO:0009409 response to cold IEP Neighborhood
BP GO:0009416 response to light stimulus IEP Neighborhood
BP GO:0009560 embryo sac egg cell differentiation IEP Neighborhood
BP GO:0009648 photoperiodism IEP Neighborhood
BP GO:0009649 entrainment of circadian clock IEP Neighborhood
BP GO:0009909 regulation of flower development IEP Neighborhood
BP GO:0009934 regulation of meristem structural organization IEP Neighborhood
BP GO:0010048 vernalization response IEP Neighborhood
BP GO:0010074 maintenance of meristem identity IEP Neighborhood
BP GO:0010090 trichome morphogenesis IEP Neighborhood
BP GO:0010091 trichome branching IEP Neighborhood
BP GO:0010138 pyrimidine ribonucleotide salvage IEP Neighborhood
MF GO:0010283 pinoresinol reductase activity IEP Neighborhood
BP GO:0010482 regulation of epidermal cell division IEP Neighborhood
MF GO:0010485 H4 histone acetyltransferase activity IEP Neighborhood
BP GO:0010638 positive regulation of organelle organization IEP Neighborhood
BP GO:0010639 negative regulation of organelle organization IEP Neighborhood
BP GO:0010675 regulation of cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0010769 regulation of cell morphogenesis involved in differentiation IEP Neighborhood
BP GO:0015691 cadmium ion transport IEP Neighborhood
BP GO:0015692 lead ion transport IEP Neighborhood
BP GO:0015931 nucleobase-containing compound transport IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
CC GO:0017053 transcriptional repressor complex IEP Neighborhood
BP GO:0018345 protein palmitoylation IEP Neighborhood
MF GO:0019205 nucleobase-containing compound kinase activity IEP Neighborhood
MF GO:0019206 nucleoside kinase activity IEP Neighborhood
BP GO:0019827 stem cell population maintenance IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
BP GO:0022412 cellular process involved in reproduction in multicellular organism IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0022603 regulation of anatomical structure morphogenesis IEP Neighborhood
BP GO:0022610 biological adhesion IEP Neighborhood
BP GO:0030036 actin cytoskeleton organization IEP Neighborhood
BP GO:0030154 cell differentiation IEP Neighborhood
BP GO:0030832 regulation of actin filament length IEP Neighborhood
BP GO:0030833 regulation of actin filament polymerization IEP Neighborhood
BP GO:0030834 regulation of actin filament depolymerization IEP Neighborhood
BP GO:0030835 negative regulation of actin filament depolymerization IEP Neighborhood
BP GO:0030837 negative regulation of actin filament polymerization IEP Neighborhood
BP GO:0030838 positive regulation of actin filament polymerization IEP Neighborhood
BP GO:0030856 regulation of epithelial cell differentiation IEP Neighborhood
BP GO:0031128 developmental induction IEP Neighborhood
BP GO:0031129 inductive cell-cell signaling IEP Neighborhood
BP GO:0031333 negative regulation of protein complex assembly IEP Neighborhood
BP GO:0031334 positive regulation of protein complex assembly IEP Neighborhood
BP GO:0032262 pyrimidine nucleotide salvage IEP Neighborhood
BP GO:0032271 regulation of protein polymerization IEP Neighborhood
BP GO:0032272 negative regulation of protein polymerization IEP Neighborhood
BP GO:0032273 positive regulation of protein polymerization IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0032535 regulation of cellular component size IEP Neighborhood
BP GO:0032881 regulation of polysaccharide metabolic process IEP Neighborhood
BP GO:0032956 regulation of actin cytoskeleton organization IEP Neighborhood
BP GO:0032970 regulation of actin filament-based process IEP Neighborhood
BP GO:0032989 cellular component morphogenesis IEP Neighborhood
BP GO:0033043 regulation of organelle organization IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Neighborhood
BP GO:0042455 ribonucleoside biosynthetic process IEP Neighborhood
BP GO:0042726 flavin-containing compound metabolic process IEP Neighborhood
BP GO:0042814 monopolar cell growth IEP Neighborhood
BP GO:0043097 pyrimidine nucleoside salvage IEP Neighborhood
BP GO:0043153 entrainment of circadian clock by photoperiod IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043173 nucleotide salvage IEP Neighborhood
BP GO:0043174 nucleoside salvage IEP Neighborhood
BP GO:0043242 negative regulation of protein complex disassembly IEP Neighborhood
BP GO:0043244 regulation of protein complex disassembly IEP Neighborhood
BP GO:0043254 regulation of protein complex assembly IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044087 regulation of cellular component biogenesis IEP Neighborhood
BP GO:0044089 positive regulation of cellular component biogenesis IEP Neighborhood
BP GO:0044206 UMP salvage IEP Neighborhood
MF GO:0044212 transcription regulatory region DNA binding IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
BP GO:0044770 cell cycle phase transition IEP Neighborhood
BP GO:0044772 mitotic cell cycle phase transition IEP Neighborhood
BP GO:0044843 cell cycle G1/S phase transition IEP Neighborhood
BP GO:0045010 actin nucleation IEP Neighborhood
BP GO:0045604 regulation of epidermal cell differentiation IEP Neighborhood
BP GO:0045682 regulation of epidermis development IEP Neighborhood
BP GO:0046049 UMP metabolic process IEP Neighborhood
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP Neighborhood
BP GO:0046132 pyrimidine ribonucleoside biosynthetic process IEP Neighborhood
BP GO:0046134 pyrimidine nucleoside biosynthetic process IEP Neighborhood
BP GO:0046443 FAD metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0048449 floral organ formation IEP Neighborhood
BP GO:0048530 fruit morphogenesis IEP Neighborhood
BP GO:0048573 photoperiodism, flowering IEP Neighborhood
BP GO:0048580 regulation of post-embryonic development IEP Neighborhood
BP GO:0048831 regulation of shoot system development IEP Neighborhood
BP GO:0048869 cellular developmental process IEP Neighborhood
BP GO:0050657 nucleic acid transport IEP Neighborhood
BP GO:0050658 RNA transport IEP Neighborhood
BP GO:0050793 regulation of developmental process IEP Neighborhood
BP GO:0051028 mRNA transport IEP Neighborhood
BP GO:0051128 regulation of cellular component organization IEP Neighborhood
BP GO:0051129 negative regulation of cellular component organization IEP Neighborhood
BP GO:0051130 positive regulation of cellular component organization IEP Neighborhood
BP GO:0051168 nuclear export IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
BP GO:0051236 establishment of RNA localization IEP Neighborhood
BP GO:0051239 regulation of multicellular organismal process IEP Neighborhood
BP GO:0051302 regulation of cell division IEP Neighborhood
BP GO:0051493 regulation of cytoskeleton organization IEP Neighborhood
BP GO:0051494 negative regulation of cytoskeleton organization IEP Neighborhood
BP GO:0051495 positive regulation of cytoskeleton organization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051693 actin filament capping IEP Neighborhood
BP GO:0055072 iron ion homeostasis IEP Neighborhood
BP GO:0060284 regulation of cell development IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:0071514 genetic imprinting IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0072387 flavin adenine dinucleotide metabolic process IEP Neighborhood
BP GO:0090066 regulation of anatomical structure size IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:0090435 protein localization to nuclear envelope IEP Neighborhood
CC GO:0090568 nuclear transcriptional repressor complex IEP Neighborhood
BP GO:0097435 supramolecular fiber organization IEP Neighborhood
BP GO:0098727 maintenance of cell number IEP Neighborhood
BP GO:0110053 regulation of actin filament organization IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901879 regulation of protein depolymerization IEP Neighborhood
BP GO:1901880 negative regulation of protein depolymerization IEP Neighborhood
BP GO:1902903 regulation of supramolecular fiber organization IEP Neighborhood
BP GO:1902904 negative regulation of supramolecular fiber organization IEP Neighborhood
BP GO:1902905 positive regulation of supramolecular fiber organization IEP Neighborhood
BP GO:1903047 mitotic cell cycle process IEP Neighborhood
BP GO:1905393 plant organ formation IEP Neighborhood
BP GO:2000024 regulation of leaf development IEP Neighborhood
BP GO:2000026 regulation of multicellular organismal development IEP Neighborhood
BP GO:2000039 regulation of trichome morphogenesis IEP Neighborhood
BP GO:2000241 regulation of reproductive process IEP Neighborhood
BP GO:2000379 positive regulation of reactive oxygen species metabolic process IEP Neighborhood
BP GO:2000904 regulation of starch metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001108 Peptidase_A22A 12 443
No external refs found!