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  5. Gb_03432

Gb_03432


Description : Pentatricopeptide repeat-containing protein At1g03560, mitochondrial OS=Arabidopsis thaliana (sp|q9lr67|ppr9_arath : 681.0)


Gene families : OG0010098 (Archaeplastida) Phylogenetic Tree(s): OG0010098_tree ,
OG_05_0010141 (LandPlants) Phylogenetic Tree(s): OG_05_0010141_tree ,
OG_06_0008954 (SeedPlants) Phylogenetic Tree(s): OG_06_0008954_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_03432
Cluster HCCA: Cluster_273

Target Alias Description ECC score Gene Family Method Actions
Zm00001e006825_P001 No alias Pentatricopeptide repeat-containing protein At1g03560,... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0003964 RNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity IEP Neighborhood
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 616 664
IPR002885 Pentatricopeptide_repeat 336 383
IPR002885 Pentatricopeptide_repeat 405 452
IPR002885 Pentatricopeptide_repeat 510 559
IPR002885 Pentatricopeptide_repeat 723 748
IPR002885 Pentatricopeptide_repeat 583 613
IPR002885 Pentatricopeptide_repeat 479 508
IPR002885 Pentatricopeptide_repeat 681 712
No external refs found!