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  5. Gb_03447

Gb_03447


Description : A-class RAB GTPase


Gene families : OG0000173 (Archaeplastida) Phylogenetic Tree(s): OG0000173_tree ,
OG_05_0001287 (LandPlants) Phylogenetic Tree(s): OG_05_0001287_tree ,
OG_06_0001319 (SeedPlants) Phylogenetic Tree(s): OG_06_0001319_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_03447
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00103890 evm_27.TU.AmTr_v1... Vesicle trafficking.regulation of membrane tethering and... 0.02 Archaeplastida
AT1G01200 RABA3, ATRAB-A3, ATRABA3 RAB GTPase homolog A3 0.05 Archaeplastida
AT1G07410 RABA2b,... RAB GTPase homolog A2B 0.02 Archaeplastida
AT1G16920 ATRABA1B, RAB11, RABA1b RAB GTPase homolog A1B 0.02 Archaeplastida
AT1G73640 RABA6a, AtRABA6a RAB GTPase homolog A6A 0.05 Archaeplastida
AT4G18430 AtRABA1e, RABA1e RAB GTPase homolog A1E 0.04 Archaeplastida
GSVIVT01020651001 No alias Ras-related protein RABA1e OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01027396001 No alias Vesicle trafficking.regulation of membrane tethering and... 0.03 Archaeplastida
LOC_Os01g54590.1 No alias A-class RAB GTPase 0.03 Archaeplastida
LOC_Os05g01480.1 No alias A-class RAB GTPase 0.02 Archaeplastida
LOC_Os05g20050.1 No alias A-class RAB GTPase 0.03 Archaeplastida
LOC_Os05g44070.1 No alias A-class RAB GTPase 0.04 Archaeplastida
MA_15386g0010 No alias A-class RAB GTPase 0.01 Archaeplastida
Pp3c23_7840V3.1 No alias RAB GTPase homolog A4D 0.01 Archaeplastida
Smo146310 No alias Vesicle trafficking.regulation of membrane tethering and... 0.03 Archaeplastida
Smo148444 No alias Vesicle trafficking.regulation of membrane tethering and... 0.03 Archaeplastida
Smo158820 No alias Vesicle trafficking.regulation of membrane tethering and... 0.04 Archaeplastida
Solyc01g096220.3.1 No alias A-class RAB GTPase 0.03 Archaeplastida
Solyc03g006270.3.1 No alias A-class RAB GTPase 0.04 Archaeplastida
Solyc05g052900.3.1 No alias A-class RAB GTPase 0.02 Archaeplastida
Solyc06g005810.3.1 No alias A-class RAB GTPase 0.04 Archaeplastida
Solyc07g053480.4.1 No alias A-class RAB GTPase 0.02 Archaeplastida
Zm00001e000673_P001 No alias A-class RAB GTPase 0.03 Archaeplastida
Zm00001e027669_P001 No alias A-class RAB GTPase 0.02 Archaeplastida
Zm00001e028750_P001 No alias A-class RAB GTPase 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004664 prephenate dehydratase activity IEP Neighborhood
MF GO:0005102 signaling receptor binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006558 L-phenylalanine metabolic process IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0008083 growth factor activity IEP Neighborhood
BP GO:0008283 cell proliferation IEP Neighborhood
BP GO:0009094 L-phenylalanine biosynthetic process IEP Neighborhood
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0030545 receptor regulator activity IEP Neighborhood
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0048018 receptor ligand activity IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Neighborhood
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Neighborhood
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001806 Small_GTPase 17 177
No external refs found!