1. Home
  2. Species
  3. Gingko biloba
  4. Sequence
  5. Gb_03481

Gb_03481


Description : Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana (sp|q9shz8|pp168_arath : 637.0)


Gene families : OG0010914 (Archaeplastida) Phylogenetic Tree(s): OG0010914_tree ,
OG_05_0008543 (LandPlants) Phylogenetic Tree(s): OG_05_0008543_tree ,
OG_06_0002335 (SeedPlants) Phylogenetic Tree(s): OG_06_0002335_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_03481
Cluster HCCA: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
Gb_23075 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.06 Archaeplastida
Gb_28758 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.05 Archaeplastida
MA_481619g0010 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.03 Archaeplastida
MA_491886g0010 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 606 629
IPR002885 Pentatricopeptide_repeat 672 699
IPR002885 Pentatricopeptide_repeat 241 264
IPR002885 Pentatricopeptide_repeat 429 477
IPR002885 Pentatricopeptide_repeat 165 213
IPR002885 Pentatricopeptide_repeat 531 579
IPR002885 Pentatricopeptide_repeat 297 345
IPR032867 DYW_dom 704 828
IPR002885 Pentatricopeptide_repeat 265 295
IPR002885 Pentatricopeptide_repeat 398 426
No external refs found!