Gb_03550

Description : Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana (sp|q3e6q1|ppr32_arath : 572.0)

Gene families : OG0016307 (Archaeplastida) Phylogenetic Tree(s): OG0016307_tree ,
OG_05_0015855 (LandPlants) Phylogenetic Tree(s): OG_05_0015855_tree ,
OG_06_0015620 (SeedPlants) Phylogenetic Tree(s): OG_06_0015620_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_03550
Cluster	HCCA: Cluster_34

Target	Alias	Description	ECC score	Gene Family Method	Actions
MA_109221g0020	No alias	Pentatricopeptide repeat-containing protein At1g11290,...	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006353	DNA-templated transcription, termination	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	97	117
IPR002885	Pentatricopeptide_repeat	635	661
IPR002885	Pentatricopeptide_repeat	391	437
IPR002885	Pentatricopeptide_repeat	491	539
IPR002885	Pentatricopeptide_repeat	290	336
IPR002885	Pentatricopeptide_repeat	187	235
IPR032867	DYW_dom	665	789

External Links

No external refs found!