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  5. Gb_03554

Gb_03554


Description : Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana (sp|q9zt94|polr2_arath : 144.0)


Gene families : OG0000100 (Archaeplastida) Phylogenetic Tree(s): OG0000100_tree ,
OG_05_0000036 (LandPlants) Phylogenetic Tree(s): OG_05_0000036_tree ,
OG_06_0015553 (SeedPlants) Phylogenetic Tree(s): OG_06_0015553_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_03554

Target Alias Description ECC score Gene Family Method Actions
Solyc01g058685.1.1 No alias no hits & (original description: none) 0.01 Archaeplastida
Solyc01g150117.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.08 Archaeplastida
Solyc04g005015.1.1 No alias no hits & (original description: none) 0.12 Archaeplastida
Solyc06g011407.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.25 Archaeplastida
Solyc06g033955.1.1 No alias no hits & (original description: none) 0.14 Archaeplastida
Solyc07g017605.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.03 Archaeplastida
Solyc07g040905.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.01 Archaeplastida
Solyc07g061865.1.1 No alias No annotation 0.01 Archaeplastida
Solyc08g042065.1.1 No alias No annotation 0.01 Archaeplastida
Solyc08g065695.1.1 No alias No annotation 0.1 Archaeplastida
Solyc08g066495.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc10g018197.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.5 Archaeplastida
Solyc10g049365.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.12 Archaeplastida
Solyc11g020847.1.1 No alias No annotation 0.01 Archaeplastida
Solyc11g063747.1.1 No alias No annotation 0.2 Archaeplastida
Solyc12g040817.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0015074 DNA integration IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!