AT2G18600

Description : Ubiquitin-conjugating enzyme family protein

Gene families : OG0001800 (Archaeplastida) Phylogenetic Tree(s): OG0001800_tree ,
OG_05_0002301 (LandPlants) Phylogenetic Tree(s): OG_05_0002301_tree ,
OG_06_0043015 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G18600
Cluster	HCCA: Cluster_242

Target	Alias	Description	ECC score	Gene Family Method
Cre08.g370850	No alias	Protein degradation.peptide tagging.Related-to-Ubiquitin...	0.02	Archaeplastida
GSVIVT01031919001	No alias	Protein degradation.peptide tagging.Related-to-Ubiquitin...	0.02	Archaeplastida
Gb_16788	No alias	RUB conjugation E2 protein (RCE1)	0.03	Archaeplastida
Mp2g16580.1	No alias	RUB conjugation E2 protein (RCE1)	0.02	Archaeplastida
Pp3c13_8210V3.1	No alias	Ubiquitin-conjugating enzyme family protein	0.02	Archaeplastida
Solyc04g079970.3.1	No alias	RUB conjugation E2 protein (RCE1)	0.02	Archaeplastida
Solyc06g007497.1.1	No alias	RUB conjugation E2 protein (RCE1)	0.01	Archaeplastida
Zm00001e030234_P001	No alias	RUB conjugation E2 protein (RCE1)	0.05	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	ISS	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006281	DNA repair	None	Extended
BP	GO:0006301	postreplication repair	RCA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	cellular response to DNA damage stimulus	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	ISS	Interproscan
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001558	regulation of cell growth	IEP	Neighborhood
CC	GO:0005634	nucleus	IEP	Neighborhood
BP	GO:0006260	DNA replication	IEP	Neighborhood
BP	GO:0006261	DNA-dependent DNA replication	IEP	Neighborhood
BP	GO:0006304	DNA modification	IEP	Neighborhood
BP	GO:0010498	proteasomal protein catabolic process	IEP	Neighborhood
BP	GO:0022603	regulation of anatomical structure morphogenesis	IEP	Neighborhood
BP	GO:0022604	regulation of cell morphogenesis	IEP	Neighborhood
BP	GO:0030163	protein catabolic process	IEP	Neighborhood
BP	GO:0035966	response to topologically incorrect protein	IEP	Neighborhood
BP	GO:0042023	DNA endoreduplication	IEP	Neighborhood
BP	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	IEP	Neighborhood
BP	GO:0043248	proteasome assembly	IEP	Neighborhood
BP	GO:0044786	cell cycle DNA replication	IEP	Neighborhood
BP	GO:0048638	regulation of developmental growth	IEP	Neighborhood
BP	GO:0051510	regulation of unidimensional cell growth	IEP	Neighborhood
BP	GO:0051788	response to misfolded protein	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000608	UBQ-conjugat_E2	35	170

External Links

No external refs found!

AT2G18600

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation