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  5. AT2G18880

AT2G18880 (VEL2)


Aliases : VEL2

Description : vernalization5/VIN3-like


Gene families : OG0001466 (Archaeplastida) Phylogenetic Tree(s): OG0001466_tree ,
OG_05_0001111 (LandPlants) Phylogenetic Tree(s): OG_05_0001111_tree ,
OG_06_0010968 (SeedPlants) Phylogenetic Tree(s): OG_06_0010968_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G18880
Cluster HCCA: Cluster_170


Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
BP GO:0009409 response to cold IEP Interproscan
BP GO:0070417 cellular response to cold IEP Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004034 aldose 1-epimerase activity IEP Neighborhood
MF GO:0004126 cytidine deaminase activity IEP Neighborhood
MF GO:0004567 beta-mannosidase activity IEP Neighborhood
BP GO:0006012 galactose metabolic process IEP Neighborhood
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Neighborhood
BP GO:0006216 cytidine catabolic process IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
BP GO:0009119 ribonucleoside metabolic process IEP Neighborhood
BP GO:0009164 nucleoside catabolic process IEP Neighborhood
BP GO:0009806 lignan metabolic process IEP Neighborhood
BP GO:0009807 lignan biosynthetic process IEP Neighborhood
MF GO:0009815 1-aminocyclopropane-1-carboxylate oxidase activity IEP Neighborhood
BP GO:0009972 cytidine deamination IEP Neighborhood
MF GO:0015923 mannosidase activity IEP Neighborhood
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Neighborhood
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Neighborhood
MF GO:0016985 mannan endo-1,4-beta-mannosidase activity IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
MF GO:0019239 deaminase activity IEP Neighborhood
BP GO:0019439 aromatic compound catabolic process IEP Neighborhood
CC GO:0031012 extracellular matrix IEP Neighborhood
BP GO:0034655 nucleobase-containing compound catabolic process IEP Neighborhood
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP Neighborhood
BP GO:0042454 ribonucleoside catabolic process IEP Neighborhood
BP GO:0044270 cellular nitrogen compound catabolic process IEP Neighborhood
BP GO:0046087 cytidine metabolic process IEP Neighborhood
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP Neighborhood
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP Neighborhood
BP GO:0046135 pyrimidine nucleoside catabolic process IEP Neighborhood
BP GO:0046700 heterocycle catabolic process IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
BP GO:0070542 response to fatty acid IEP Neighborhood
BP GO:0071398 cellular response to fatty acid IEP Neighborhood
CC GO:0071944 cell periphery IEP Neighborhood
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Neighborhood
BP GO:0072529 pyrimidine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
BP GO:1901361 organic cyclic compound catabolic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
BP GO:1901658 glycosyl compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR032881 Oberon_PHD 119 238
No external refs found!