- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : hydroxyproline-rich glycoprotein family protein
Gene families : OG0006807 (Archaeplastida) Phylogenetic Tree(s): OG0006807_tree ,
OG_05_0005570 (LandPlants) Phylogenetic Tree(s): OG_05_0005570_tree ,
OG_06_0004094 (SeedPlants) Phylogenetic Tree(s): OG_06_0004094_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT2G18910 | |
| Cluster | HCCA: Cluster_51 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Zm00001e008553_P003 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | ND | Interproscan |
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000373 | Group II intron splicing | IEP | Neighborhood |
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Neighborhood |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Neighborhood |
| MF | GO:0003905 | alkylbase DNA N-glycosylase activity | IEP | Neighborhood |
| MF | GO:0004300 | enoyl-CoA hydratase activity | IEP | Neighborhood |
| MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | Neighborhood |
| MF | GO:0004722 | protein serine/threonine phosphatase activity | IEP | Neighborhood |
| MF | GO:0005200 | structural constituent of cytoskeleton | IEP | Neighborhood |
| CC | GO:0005778 | peroxisomal membrane | IEP | Neighborhood |
| BP | GO:0006338 | chromatin remodeling | IEP | Neighborhood |
| BP | GO:0006473 | protein acetylation | IEP | Neighborhood |
| BP | GO:0006475 | internal protein amino acid acetylation | IEP | Neighborhood |
| MF | GO:0008419 | RNA lariat debranching enzyme activity | IEP | Neighborhood |
| MF | GO:0008725 | DNA-3-methyladenine glycosylase activity | IEP | Neighborhood |
| BP | GO:0016573 | histone acetylation | IEP | Neighborhood |
| MF | GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | IEP | Neighborhood |
| MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | Neighborhood |
| MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Neighborhood |
| BP | GO:0018393 | internal peptidyl-lysine acetylation | IEP | Neighborhood |
| BP | GO:0018394 | peptidyl-lysine acetylation | IEP | Neighborhood |
| MF | GO:0019104 | DNA N-glycosylase activity | IEP | Neighborhood |
| CC | GO:0031903 | microbody membrane | IEP | Neighborhood |
| MF | GO:0043733 | DNA-3-methylbase glycosylase activity | IEP | Neighborhood |
| CC | GO:0044438 | microbody part | IEP | Neighborhood |
| CC | GO:0044439 | peroxisomal part | IEP | Neighborhood |
| BP | GO:0097031 | obsolete mitochondrial respiratory chain complex I biogenesis | IEP | Neighborhood |
| BP | GO:0097034 | obsolete mitochondrial respiratory chain complex IV biogenesis | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |