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Gb_03898


Description : Probable calcium-binding protein CML25 OS=Arabidopsis thaliana (sp|q9fyk2|cml25_arath : 161.0)


Gene families : OG0000031 (Archaeplastida) Phylogenetic Tree(s): OG0000031_tree ,
OG_05_0000085 (LandPlants) Phylogenetic Tree(s): OG_05_0000085_tree ,
OG_06_0000352 (SeedPlants) Phylogenetic Tree(s): OG_06_0000352_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_03898
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
AT2G41410 No alias Calcium-binding EF-hand family protein 0.04 Archaeplastida
AT3G29000 No alias Calcium-binding EF-hand family protein 0.02 Archaeplastida
GSVIVT01015585001 No alias Calmodulin-like protein 2 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01033567001 No alias Probable calcium-binding protein CML36 OS=Arabidopsis thaliana 0.02 Archaeplastida
LOC_Os01g04330.1 No alias Probable calcium-binding protein CML16 OS=Oryza sativa... 0.03 Archaeplastida
LOC_Os05g13580.1 No alias Probable calcium-binding protein CML18 OS=Oryza sativa... 0.07 Archaeplastida
LOC_Os06g07560.1 No alias Probable calcium-binding protein CML30 OS=Oryza sativa... 0.06 Archaeplastida
LOC_Os07g48340.1 No alias Probable calcium-binding protein CML24 OS=Oryza sativa... 0.05 Archaeplastida
LOC_Os11g04560.1 No alias Probable calcium-binding protein CML36 OS=Arabidopsis... 0.04 Archaeplastida
LOC_Os12g04360.1 No alias Probable calcium-binding protein CML36 OS=Arabidopsis... 0.06 Archaeplastida
MA_130379g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_18054g0030 No alias Calcium-binding protein CML42 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_27386g0010 No alias Probable calcium-binding protein CML27 OS=Oryza sativa... 0.02 Archaeplastida
MA_7799814g0010 No alias Calcium-binding protein CML42 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Mp5g15630.1 No alias Probable calcium-binding protein CML10 OS=Oryza sativa... 0.03 Archaeplastida
Mp5g15820.1 No alias Probable calcium-binding protein CML10 OS=Oryza sativa... 0.04 Archaeplastida
Mp6g10070.1 No alias Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Mp6g18000.1 No alias Calmodulin-like protein 3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp6g20470.1 No alias Probable calcium-binding protein CML22 OS=Oryza sativa... 0.02 Archaeplastida
Pp3c6_1770V3.1 No alias EF hand calcium-binding protein family 0.02 Archaeplastida
Solyc10g079420.1.1 No alias Probable calcium-binding protein CML36 OS=Arabidopsis... 0.03 Archaeplastida
Solyc10g081170.2.1 No alias Calmodulin-related protein OS=Petunia hybrida... 0.03 Archaeplastida
Zm00001e009835_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e011787_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e016987_P001 No alias Probable calcium-binding protein CML16 OS=Oryza sativa... 0.02 Archaeplastida
Zm00001e018064_P001 No alias Calmodulin-like protein 5 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Zm00001e031053_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e038252_P001 No alias Probable calcium-binding protein CML27 OS=Oryza sativa... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 49 109
IPR002048 EF_hand_dom 122 184
No external refs found!