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  5. Gb_03946

Gb_03946


Description : no hits & (original description: none)


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0003505 (LandPlants) Phylogenetic Tree(s): OG_05_0003505_tree ,
OG_06_0006937 (SeedPlants) Phylogenetic Tree(s): OG_06_0006937_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_03946
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00198340 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00019p00149380 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AMTR_s00152p00054630 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AT1G15100 RHA2A RING-H2 finger A2A 0.02 Archaeplastida
AT1G72220 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT2G17450 RHA3A RING-H2 finger A3A 0.03 Archaeplastida
AT2G35910 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT3G03550 No alias RING/U-box superfamily protein 0.07 Archaeplastida
AT3G10910 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT3G20395 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT3G61550 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT4G09100 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT4G24015 No alias RING/U-box superfamily protein 0.06 Archaeplastida
AT5G17600 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT5G41400 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G58580 ATL63, TL63 TOXICOS EN LEVADURA 63 0.03 Archaeplastida
GSVIVT01009096001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01027769001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Gb_28980 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os01g61470.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os02g43120.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g46600.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os02g54830.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os03g05570.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os04g49700.1 No alias E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os06g07100.2 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os06g50370.1 No alias NEP1-interacting protein 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os08g37760.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os11g02424.1 No alias RING-H2 finger protein ATL74 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_10434759g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_1115518g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_25345g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_31462g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_377006g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_391931g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_462422g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_634100g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp6g19130.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c23_10580V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Pp3c26_11650V3.1 No alias TOXICOS EN LEVADURA 2 0.04 Archaeplastida
Solyc02g068415.1.1 No alias RING-H2 finger protein ATL73 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc04g074820.3.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Solyc04g081890.1.1 No alias E3 ubiquitin-protein ligase ATL23 OS=Arabidopsis... 0.03 Archaeplastida
Solyc06g061250.3.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc06g064440.3.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc09g066300.3.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc10g009487.1.1 No alias RING-H2 finger protein ATL20 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc11g005290.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc11g005300.2.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e007956_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e008560_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e014832_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e015905_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e016470_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e019779_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e023585_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e023908_P006 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e032838_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
CC GO:0031226 intrinsic component of plasma membrane IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
CC GO:0046658 anchored component of plasma membrane IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 3 39
No external refs found!