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Gb_04235


Description : Proteasome activator subunit 4 OS=Arabidopsis thaliana (sp|f4jc97|psme4_arath : 757.0)


Gene families : OG0002150 (Archaeplastida) Phylogenetic Tree(s): OG0002150_tree ,
OG_05_0003397 (LandPlants) Phylogenetic Tree(s): OG_05_0003397_tree ,
OG_06_0007780 (SeedPlants) Phylogenetic Tree(s): OG_06_0007780_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_04235
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00109710 evm_27.TU.AmTr_v1... Proteasome activator subunit 4 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT3G13330 PA200 proteasome activating protein 200 0.04 Archaeplastida
Cre14.g628702 No alias Proteasome activator subunit 4 OS=Arabidopsis thaliana 0.04 Archaeplastida
Pp3c15_5520V3.1 No alias proteasome activating protein 200 0.02 Archaeplastida
Smo179234 No alias Proteasome activator subunit 4 OS=Arabidopsis thaliana 0.04 Archaeplastida
Smo236562 No alias Proteasome activator subunit 4 OS=Arabidopsis thaliana 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0017069 snRNA binding IEP Neighborhood
MF GO:0017070 U6 snRNA binding IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0030623 U5 snRNA binding IEP Neighborhood
InterPro domains Description Start Stop
IPR021843 PSME4_C 713 797
No external refs found!