1. Home
  2. Species
  3. Gingko biloba
  4. Sequence
  5. Gb_04261

Gb_04261


Description : endo-beta-1,4-mannanase


Gene families : OG0000315 (Archaeplastida) Phylogenetic Tree(s): OG0000315_tree ,
OG_05_0000179 (LandPlants) Phylogenetic Tree(s): OG_05_0000179_tree ,
OG_06_0001045 (SeedPlants) Phylogenetic Tree(s): OG_06_0001045_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_04261
Cluster HCCA: Cluster_310

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00136900 evm_27.TU.AmTr_v1... Cell wall.hemicellulose.heteromannan.modification and... 0.06 Archaeplastida
GSVIVT01009746001 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.03 Archaeplastida
GSVIVT01018923001 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.07 Archaeplastida
GSVIVT01037212001 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.03 Archaeplastida
GSVIVT01037215001 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.03 Archaeplastida
Gb_14560 No alias endo-beta-1,4-mannanase 0.05 Archaeplastida
LOC_Os01g47400.1 No alias endo-beta-1,4-mannanase 0.04 Archaeplastida
MA_134938g0010 No alias No annotation 0.04 Archaeplastida
MA_6558g0010 No alias endo-beta-1,4-mannanase 0.02 Archaeplastida
Mp8g13360.1 No alias endo-beta-1,4-mannanase 0.02 Archaeplastida
Pp3c5_23790V3.1 No alias Glycosyl hydrolase superfamily protein 0.02 Archaeplastida
Pp3c6_26420V3.1 No alias Glycosyl hydrolase superfamily protein 0.03 Archaeplastida
Smo101148 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.04 Archaeplastida
Solyc02g084990.3.1 No alias endo-beta-1,4-mannanase 0.06 Archaeplastida
Zm00001e019799_P001 No alias No annotation 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
InterPro domains Description Start Stop
IPR001547 Glyco_hydro_5 41 328
No external refs found!